RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 NRDCO43847 1150 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 MCM2P49736 904 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 CPLX2Q6PUV4 134 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 USP21Q9UK80 565 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 ERICH2A1L162 156 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 AOX1Q06278 1338 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 MEIS3Q99687 375 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 CEP85Q6P2H3 762 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
PDLIM5-201ENST00000317968 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 ST5P78524 1137 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 ZSCAN25Q6NSZ9 544 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 CNNM1Q9NRU3 951 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 MX1P20591 662 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 TRDNQ13061 729 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 C22orf23Q9BZE7 217 aa10.33□□□□□ -0.76
PDLIM5-201ENST00000317968 KRT24Q2M2I5 525 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 IGHMBP2P38935 993 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 MPHOSPH8Q99549 860 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 MED1Q15648 1581 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 CYP27B1O15528 508 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 TTC41PQ6P2S7 1318 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 RFC4P35249 363 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 RASSF8Q8NHQ8 419 aa10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 KRI1Q8N9T8 703 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-201ENST00000317968 DHX16O60231 1041 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 IGHDP01880 384 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 APPP05067 770 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 RABEP1Q15276 862 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 NFAT5O94916 1531 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 IL15P40933 162 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 SHPRHQ149N8 1683 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 ANKRD18BA2A2Z9 1011 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 VPS72Q15906 364 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 PXDNQ92626 1479 aa10.31□□□□□ -0.76
PDLIM5-201ENST00000317968 ECHDC1Q9NTX5 307 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 IL6STP40189 918 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 CHAF1AQ13111 956 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 CDC5LQ99459 802 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 TRMT112Q9UI30 125 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 PDIA4P13667 645 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 G2E3Q7L622 706 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 CCDC87Q9NVE4 849 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 TICAM2Q86XR7 235 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 PIK3C2AO00443 1686 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 L1TD1Q5T7N2 865 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 EXOC6BQ9Y2D4 811 aa10.3□□□□□ -0.76
PDLIM5-201ENST00000317968 UBE3BQ7Z3V4 1068 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 NEUROD6Q96NK8 337 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 PHAXQ9H814 394 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 ATP10DQ9P241 1426 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 AACSQ86V21 672 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 PSMA5P28066 241 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 BEND3Q5T5X7 828 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 CCDC43Q96MW1 224 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 SSH3Q8TE77 659 aa10.29□□□□□ -0.76
PDLIM5-201ENST00000317968 GCKRQ14397 625 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 FSD1Q9BTV5 496 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 ERVV-1B6SEH8 477 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 PRIM1P49642 420 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 GBP4Q96PP9 640 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 KIAA2012Q0VF49 1180 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 ANO2Q9NQ90 1003 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 TCIRG1Q13488 830 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 IFIT1P09914 478 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 CCDC152Q4G0S7 254 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
PDLIM5-201ENST00000317968 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.76
PDLIM5-201ENST00000317968 COL5A2P05997 1499 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 WWC2Q6AWC2 1192 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 DNAJC10Q8IXB1 793 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 EVI5LQ96CN4 794 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 ANXA1P04083 346 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 UTP14AQ9BVJ6 771 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-201ENST00000317968 USP44Q9H0E7 712 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms