RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 BRD1O95696 1058 aa16.76■□□□□ 0.27
ATG4C-201ENST00000317868 ZNF445P59923 1031 aa16.76■□□□□ 0.27
ATG4C-201ENST00000317868 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
ATG4C-201ENST00000317868 PHKG2P15735 406 aa16.76■□□□□ 0.27
ATG4C-201ENST00000317868 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
ATG4C-201ENST00000317868 COL15A1P39059 1388 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 GLRX3O76003 335 aaKnown RBP16.75■□□□□ 0.27
ATG4C-201ENST00000317868 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
ATG4C-201ENST00000317868 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 CPDO75976 1380 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 GRM8O00222 908 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 TTC14Q96N46 770 aa16.75■□□□□ 0.27
ATG4C-201ENST00000317868 RRAGDQ9NQL2 400 aaPredicted RBP16.75■□□□□ 0.27
ATG4C-201ENST00000317868 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
ATG4C-201ENST00000317868 KCNB2Q92953 911 aa16.74■□□□□ 0.27
ATG4C-201ENST00000317868 SUCLG2Q96I99 432 aa16.74■□□□□ 0.27
ATG4C-201ENST00000317868 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
ATG4C-201ENST00000317868 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
ATG4C-201ENST00000317868 SNX14Q9Y5W7 946 aa16.73■□□□□ 0.27
ATG4C-201ENST00000317868 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
ATG4C-201ENST00000317868 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
ATG4C-201ENST00000317868 SNRKQ9NRH2 765 aa16.73■□□□□ 0.27
ATG4C-201ENST00000317868 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
ATG4C-201ENST00000317868 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
ATG4C-201ENST00000317868 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
ATG4C-201ENST00000317868 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
ATG4C-201ENST00000317868 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
ATG4C-201ENST00000317868 SASH1O94885 1247 aa16.71■□□□□ 0.27
ATG4C-201ENST00000317868 RAPGEF4Q8WZA2 1011 aa16.71■□□□□ 0.27
ATG4C-201ENST00000317868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.71■□□□□ 0.27
ATG4C-201ENST00000317868 ARXQ96QS3 562 aa16.71■□□□□ 0.27
ATG4C-201ENST00000317868 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.27
ATG4C-201ENST00000317868 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
ATG4C-201ENST00000317868 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
ATG4C-201ENST00000317868 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.26
ATG4C-201ENST00000317868 JCADQ9P266 1359 aa16.71■□□□□ 0.26
ATG4C-201ENST00000317868 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
ATG4C-201ENST00000317868 TATP17735 454 aaPredicted RBP16.7■□□□□ 0.26
ATG4C-201ENST00000317868 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
ATG4C-201ENST00000317868 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
ATG4C-201ENST00000317868 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
ATG4C-201ENST00000317868 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
ATG4C-201ENST00000317868 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
ATG4C-201ENST00000317868 LARP1Q6PKG0 1096 aaKnown RBP16.69■□□□□ 0.26
ATG4C-201ENST00000317868 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
ATG4C-201ENST00000317868 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 CYP27B1O15528 508 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 DCAF5Q96JK2 942 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 ATF3P18847 181 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 GCKRQ14397 625 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
ATG4C-201ENST00000317868 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
ATG4C-201ENST00000317868 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
ATG4C-201ENST00000317868 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
ATG4C-201ENST00000317868 CWC27Q6UX04 472 aaKnown RBP16.67■□□□□ 0.26
ATG4C-201ENST00000317868 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
ATG4C-201ENST00000317868 GPATCH3Q96I76 525 aa16.67■□□□□ 0.26
ATG4C-201ENST00000317868 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
ATG4C-201ENST00000317868 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
ATG4C-201ENST00000317868 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
ATG4C-201ENST00000317868 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
ATG4C-201ENST00000317868 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
ATG4C-201ENST00000317868 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
ATG4C-201ENST00000317868 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 AACSQ86V21 672 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 XAGE3Q8WTP9 111 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 CHAMP1Q96JM3 812 aa16.66■□□□□ 0.26
ATG4C-201ENST00000317868 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 CLCN1P35523 988 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
ATG4C-201ENST00000317868 PTH1RQ03431 593 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
ATG4C-201ENST00000317868 RUFY3Q7L099 469 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
ATG4C-201ENST00000317868 AK2P54819 239 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
ATG4C-201ENST00000317868 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
ATG4C-201ENST00000317868 COPS6Q7L5N1 327 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 TMEM63CQ9P1W3 806 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
ATG4C-201ENST00000317868 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 SPEF2Q9C093 1822 aa16.64■□□□□ 0.25
ATG4C-201ENST00000317868 MBD3O95983 291 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 CASP7P55210 303 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 CCDC173Q0VFZ6 552 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms