RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TOMM22Q9NS69 142 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 DACT1Q9NYF0 836 aa8.9□□□□□ -0.98
CDHR3-201ENST00000317716 BRPF1P55201 1214 aaPredicted RBP8.9□□□□□ -0.99
CDHR3-201ENST00000317716 PPIP5K1Q6PFW1 1433 aa8.9□□□□□ -0.99
CDHR3-201ENST00000317716 UBXN4Q92575 508 aa8.9□□□□□ -0.99
CDHR3-201ENST00000317716 PIK3C2GO75747 1445 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 PDE1AP54750 535 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 UBE2HP62256 183 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 ALDH1L2Q3SY69 923 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 LRRFIP2Q9Y608 721 aaKnown RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 MROH2AA6NES4 1674 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 CLASRPQ8N2M8 674 aaKnown RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 TIGD1Q96MW7 591 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 DNAJC2Q99543 621 aaKnown RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 PALD1Q9ULE6 856 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 FCHSD2O94868 740 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 ZSCAN22P10073 491 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 DMTNQ08495 405 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 KRT222Q8N1A0 295 aa8.89□□□□□ -0.99
CDHR3-201ENST00000317716 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
CDHR3-201ENST00000317716 ADGRB3O60242 1522 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 RAB11FIP3O75154 756 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 VAMP4O75379 141 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 KIF18AQ8NI77 898 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-201ENST00000317716 NOL10Q9BSC4 688 aaKnown RBP8.88□□□□□ -0.99
CDHR3-201ENST00000317716 TRIM35Q9UPQ4 493 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 GNAI3P08754 354 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 PHF23Q9BUL5 403 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-201ENST00000317716 LRRC2Q9BYS8 371 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 LMTK2Q8IWU2 1503 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 FYB1O15117 783 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 ANXA1P04083 346 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 ESYT1Q9BSJ8 1104 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-201ENST00000317716 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
CDHR3-201ENST00000317716 SERPINC1P01008 464 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 SKILP12757 684 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 TEFQ10587 303 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 TMCO3Q6UWJ1 677 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 A0A087WWV3 80 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 SYT1P21579 422 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 ELF2Q15723 593 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 BLOC1S2Q6QNY1 142 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 PTPRUQ92729 1446 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 ADAMTS13Q76LX8 1427 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 CPLX1O14810 134 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 FAM193AP78312 1265 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDHR3-201ENST00000317716 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 C10orf67Q8IYJ2 551 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 CCDC34Q96HJ3 373 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 ALKQ9UM73 1620 aa8.87□□□□□ -0.99
CDHR3-201ENST00000317716 ABCC11Q96J66 1382 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 LMAN1P49257 510 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 TYRO3Q06418 890 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 HSP90AB2PQ58FF8 381 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 RNF216Q9NWF9 866 aaPredicted RBP8.86□□□□□ -0.99
CDHR3-201ENST00000317716 CALCOCO1Q9P1Z2 691 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 NRBP1Q9UHY1 535 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 VWDEQ8N2E2 1590 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 PDCP20941 246 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 AK2P54819 239 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 STK38Q15208 465 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 HSP90B2PQ58FF3 399 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 TMC6Q7Z403 805 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 SPATA31D1Q6ZQQ2 1576 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 KIF20AO95235 890 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 APPP05067 770 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 ANKRD44Q8N8A2 993 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 DCTPP1Q9H773 170 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
CDHR3-201ENST00000317716 F13A1P00488 732 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 TERF1P54274 439 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 UVSSAQ2YD98 709 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 CEP85Q6P2H3 762 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 AACSQ86V21 672 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 LRRC59Q96AG4 307 aaKnown RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 CCDC8Q9H0W5 538 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 NEXMIFQ5QGS0 1516 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 SFPQP23246 707 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 CCT2P78371 535 aaKnown RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 LEKR1Q6ZMV7 388 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 NOC3LQ8WTT2 800 aaKnown RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 SRRTQ9BXP5 876 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms