RNA–Protein interactions for RNA: ENST00000317221.11

ZNF559-201, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-201ENST00000317221 GTF3C6Q969F1 213 aa6.8□□□□□ -1.32
ZNF559-201ENST00000317221 ERO1AQ96HE7 468 aa6.8□□□□□ -1.32
ZNF559-201ENST00000317221 MEIS3Q99687 375 aa6.8□□□□□ -1.32
ZNF559-201ENST00000317221 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.8□□□□□ -1.32
ZNF559-201ENST00000317221 HMMRO75330 724 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 RAD51AP2Q09MP3 1159 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 CCDC144BQ3MJ40 725 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.79□□□□□ -1.32
ZNF559-201ENST00000317221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.327e-6■■□□□ 11.5
ZNF559-201ENST00000317221 CCDC144CPQ8IYA2 1237 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 SLU7O95391 586 aaKnown RBP6.79□□□□□ -1.32
ZNF559-201ENST00000317221 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 IL17RAQ96F46 866 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 NUP62CLQ9H1M0 184 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 TRMT1Q9NXH9 659 aaKnown RBP6.79□□□□□ -1.32
ZNF559-201ENST00000317221 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 SLIT1O75093 1534 aa6.79□□□□□ -1.32
ZNF559-201ENST00000317221 LIG1P18858 919 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 HSPA4P34932 840 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 AK2P54819 239 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 ARID5BQ14865 1188 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 ERCC6LQ2NKX8 1250 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 ZBTB9Q96C00 473 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 TNMDQ9H2S6 317 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 EXOC6BQ9Y2D4 811 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 TBX22Q9Y458 520 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 ATP10DQ9P241 1426 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 CCDC171Q6TFL3 1326 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 WASLO00401 505 aaPredicted RBP6.78□□□□□ -1.32
ZNF559-201ENST00000317221 HTATSF1O43719 755 aaKnown RBP6.78□□□□□ -1.32
ZNF559-201ENST00000317221 SKILP12757 684 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 ZNF165P49910 485 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 TEX35Q5T0J7 233 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 RUFY3Q7L099 469 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 RSPH14Q9UHP6 348 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 MTMR6Q9Y217 621 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 PNPLA6Q8IY17 1366 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 SOX12O15370 315 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 GJB2P29033 226 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 PLA2G4AP47712 749 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 C14orf37Q86TY3 774 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 UNC5CLQ8IV45 518 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 NUDT16Q96DE0 195 aaKnown RBP6.78□□□□□ -1.32
ZNF559-201ENST00000317221 EFCC1Q9HA90 598 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 DACT1Q9NYF0 836 aa6.78□□□□□ -1.32
ZNF559-201ENST00000317221 KNDC1Q76NI1 1749 aa6.77□□□□□ -1.32
ZNF559-201ENST00000317221 USP32Q8NFA0 1604 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 COL3A1P02461 1466 aaPredicted RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 VPS37CA5D8V6 355 aaPredicted RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 GOLGA6L4A6NEF3 574 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 POLR3GO15318 223 aaPredicted RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 H2AFXP16104 143 aaPredicted RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 TTC6Q86TZ1 520 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 TDRD7Q8NHU6 1098 aaKnown RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 TTC14Q96N46 770 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 IL25Q9H293 177 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 A0A1W2PP64 1363 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 RAD50Q92878 1312 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 NEMFO60524 1076 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 PNMA6AP0CW24 399 aaPredicted RBP6.77□□□□□ -1.33
ZNF559-201ENST00000317221 CLCN6P51797 869 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 DCTN1Q14203 1278 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 KRBA2Q6ZNG9 492 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 CCDC83Q8IWF9 413 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 RASEFQ8IZ41 740 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 NEK11Q8NG66 645 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 LRRCC1Q9C099 1032 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 TERF2IPQ9NYB0 399 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 SNX14Q9Y5W7 946 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 FAM135BQ49AJ0 1406 aa6.77□□□□□ -1.33
ZNF559-201ENST00000317221 NPHP4O75161 1426 aaPredicted RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 KRT85P78386 507 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 NUTM2GQ5VZR2 741 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 FAM173BQ6P4H8 233 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 CCAR2Q8N163 923 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 DNAJC25Q9H1X3 360 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 ZCCHC17Q9NP64 241 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 POLKQ9UBT6 870 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 SALL3Q9BXA9 1300 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 EPB41L2O43491 1005 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 CPA1P15085 419 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 SLC4A10Q6U841 1118 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 SYT10Q6XYQ8 523 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 FERMT3Q86UX7 667 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 TEX2Q8IWB9 1127 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 C10orf67Q8IYJ2 551 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 TXLNBQ8N3L3 684 aa6.76□□□□□ -1.33
ZNF559-201ENST00000317221 TFIP11Q9UBB9 837 aaKnown RBP6.76□□□□□ -1.33
ZNF559-201ENST00000317221 PTPRCP08575 1304 aa6.75□□□□□ -1.33
ZNF559-201ENST00000317221 GOLGA6L19H0YKK7 550 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms