RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 CYP2E1P05181 493 aaPredicted RBP18.12■□□□□ 0.49
CHFR-202ENST00000315585 NEK4P51957 841 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
CHFR-202ENST00000315585 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
CHFR-202ENST00000315585 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
CHFR-202ENST00000315585 CNTROBQ8N137 903 aa18.11■□□□□ 0.49
CHFR-202ENST00000315585 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
CHFR-202ENST00000315585 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
CHFR-202ENST00000315585 ERC1Q8IUD2 1116 aa18.1■□□□□ 0.49
CHFR-202ENST00000315585 ANP32BQ92688 251 aaKnown RBP18.1■□□□□ 0.49
CHFR-202ENST00000315585 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
CHFR-202ENST00000315585 MTX1Q13505 466 aa18.09■□□□□ 0.49
CHFR-202ENST00000315585 ADCY9O60503 1353 aa18.09■□□□□ 0.49
CHFR-202ENST00000315585 TTC41PQ6P2S7 1318 aa18.09■□□□□ 0.49
CHFR-202ENST00000315585 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
CHFR-202ENST00000315585 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.49
CHFR-202ENST00000315585 TOM1O60784 492 aa18.08■□□□□ 0.48
CHFR-202ENST00000315585 ANXA1P04083 346 aa18.08■□□□□ 0.48
CHFR-202ENST00000315585 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
CHFR-202ENST00000315585 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
CHFR-202ENST00000315585 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
CHFR-202ENST00000315585 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
CHFR-202ENST00000315585 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
CHFR-202ENST00000315585 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
CHFR-202ENST00000315585 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
CHFR-202ENST00000315585 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
CHFR-202ENST00000315585 IL1RAPL2Q9NP60 686 aa18.07■□□□□ 0.48
CHFR-202ENST00000315585 C5P01031 1676 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
CHFR-202ENST00000315585 CUL4AQ13619 759 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 MCTP1Q6DN14 999 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 KIAA1211Q6ZU35 1233 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 ARXQ96QS3 562 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
CHFR-202ENST00000315585 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
CHFR-202ENST00000315585 NEXNQ0ZGT2 675 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 PDIA6Q15084 440 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 TSHZ3Q63HK5 1081 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
CHFR-202ENST00000315585 PHLPP1O60346 1717 aa18.05■□□□□ 0.48
CHFR-202ENST00000315585 HSPA4P34932 840 aa18.04■□□□□ 0.48
CHFR-202ENST00000315585 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
CHFR-202ENST00000315585 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
CHFR-202ENST00000315585 TRIM44Q96DX7 344 aaPredicted RBP18.04■□□□□ 0.48
CHFR-202ENST00000315585 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
CHFR-202ENST00000315585 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
CHFR-202ENST00000315585 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
CHFR-202ENST00000315585 AIMP1Q12904 312 aaKnown RBP18.03■□□□□ 0.48
CHFR-202ENST00000315585 ZNF445P59923 1031 aa18.02■□□□□ 0.48
CHFR-202ENST00000315585 ZGPATQ8N5A5 531 aaKnown RBP18.02■□□□□ 0.48
CHFR-202ENST00000315585 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
CHFR-202ENST00000315585 USP16Q9Y5T5 823 aa18.02■□□□□ 0.48
CHFR-202ENST00000315585 COL16A1Q07092 1604 aaPredicted RBP18.02■□□□□ 0.48
CHFR-202ENST00000315585 SGSM2O43147 1006 aa18.02■□□□□ 0.47
CHFR-202ENST00000315585 MBD3O95983 291 aa18.02■□□□□ 0.47
CHFR-202ENST00000315585 MYL6BP14649 208 aa18.02■□□□□ 0.47
CHFR-202ENST00000315585 LMBRD1Q9NUN5 540 aa18.02■□□□□ 0.47
CHFR-202ENST00000315585 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.47
CHFR-202ENST00000315585 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 RAD50Q92878 1312 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 DISP2A7MBM2 1401 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 HIP1O00291 1037 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
CHFR-202ENST00000315585 UBR2Q8IWV8 1755 aa18■□□□□ 0.47
CHFR-202ENST00000315585 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
CHFR-202ENST00000315585 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
CHFR-202ENST00000315585 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
CHFR-202ENST00000315585 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
CHFR-202ENST00000315585 METTL22Q9BUU2 404 aaPredicted RBP18■□□□□ 0.47
CHFR-202ENST00000315585 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
CHFR-202ENST00000315585 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
CHFR-202ENST00000315585 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
CHFR-202ENST00000315585 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
CHFR-202ENST00000315585 UTYO14607 1347 aa17.99■□□□□ 0.47
CHFR-202ENST00000315585 GRM8O00222 908 aa17.99■□□□□ 0.47
CHFR-202ENST00000315585 EXOC5O00471 708 aa17.99■□□□□ 0.47
CHFR-202ENST00000315585 BRD1O95696 1058 aa17.99■□□□□ 0.47
CHFR-202ENST00000315585 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
CHFR-202ENST00000315585 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
CHFR-202ENST00000315585 NASPP49321 788 aaPredicted RBP17.98■□□□□ 0.47
CHFR-202ENST00000315585 PRPF40AO75400 957 aaKnown RBP17.98■□□□□ 0.47
CHFR-202ENST00000315585 G3BP1Q13283 466 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHFR-202ENST00000315585 GAS2L3Q86XJ1 694 aa17.98■□□□□ 0.47
CHFR-202ENST00000315585 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
CHFR-202ENST00000315585 PALD1Q9ULE6 856 aa17.98■□□□□ 0.47
CHFR-202ENST00000315585 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
CHFR-202ENST00000315585 SYAP1Q96A49 352 aaPredicted RBP17.97■□□□□ 0.47
CHFR-202ENST00000315585 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
CHFR-202ENST00000315585 GLI3P10071 1580 aa17.97■□□□□ 0.47
CHFR-202ENST00000315585 AK9Q5TCS8 1911 aa17.97■□□□□ 0.47
CHFR-202ENST00000315585 PDIA4P13667 645 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms