RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
GPHN-201ENST00000315266 PHF14O94880 888 aa11.97□□□□□ -0.49
GPHN-201ENST00000315266 CREBRFQ8IUR6 639 aa11.97□□□□□ -0.49
GPHN-201ENST00000315266 ESPNB1AK53 854 aa11.96□□□□□ -0.49
GPHN-201ENST00000315266 CCDC24Q8N4L8 307 aa11.96□□□□□ -0.49
GPHN-201ENST00000315266 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
GPHN-201ENST00000315266 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.5
GPHN-201ENST00000315266 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.5
GPHN-201ENST00000315266 PIK3C2AO00443 1686 aa11.96□□□□□ -0.5
GPHN-201ENST00000315266 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.5
GPHN-201ENST00000315266 ATP2B1P20020 1258 aa11.96□□□□□ -0.5
GPHN-201ENST00000315266 CEBPZQ03701 1054 aaKnown RBP11.96□□□□□ -0.5
GPHN-201ENST00000315266 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.5
GPHN-201ENST00000315266 KDRP35968 1356 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 ERC2O15083 957 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 RRAGDQ9NQL2 400 aaPredicted RBP11.95□□□□□ -0.5
GPHN-201ENST00000315266 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 SLC4A8Q2Y0W8 1093 aa11.95□□□□□ -0.5
GPHN-201ENST00000315266 TMX4Q9H1E5 349 aaPredicted RBP11.95□□□□□ -0.5
GPHN-201ENST00000315266 H3BQV1 296 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 KCNQ4P56696 695 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 NUCB2P80303 420 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
GPHN-201ENST00000315266 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 RUFY2Q8WXA3 655 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 ABCF2Q9UG63 623 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
GPHN-201ENST00000315266 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
GPHN-201ENST00000315266 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 IDH1O75874 414 aaKnown RBP11.93□□□□□ -0.5
GPHN-201ENST00000315266 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 FAM13BQ9NYF5 915 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 NUCB1Q02818 461 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 RABEP1Q15276 862 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
GPHN-201ENST00000315266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 18.1
GPHN-201ENST00000315266 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
GPHN-201ENST00000315266 A1BGP04217 495 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 MX1P20591 662 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
GPHN-201ENST00000315266 CEP126Q9P2H0 1117 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
GPHN-201ENST00000315266 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 ZBTB40Q9NUA8 1239 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 PTPRCP08575 1304 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 PKNOX2Q96KN3 472 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
GPHN-201ENST00000315266 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
GPHN-201ENST00000315266 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
GPHN-201ENST00000315266 SF3A1Q15459 793 aaKnown RBP11.91□□□□□ -0.5
GPHN-201ENST00000315266 NFXL1Q6ZNB6 911 aa11.91□□□□□ -0.5
GPHN-201ENST00000315266 RAB11FIP4Q86YS3 637 aa11.91□□□□□ -0.5
GPHN-201ENST00000315266 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
GPHN-201ENST00000315266 STARD3NLO95772 234 aa11.91□□□□□ -0.5
GPHN-201ENST00000315266 BMP2KLQ5H9B9 411 aa11.91□□□□□ -0.5
GPHN-201ENST00000315266 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
GPHN-201ENST00000315266 CPLX1O14810 134 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
GPHN-201ENST00000315266 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.5
GPHN-201ENST00000315266 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
GPHN-201ENST00000315266 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 PHKG2P15735 406 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 FERMT3Q86UX7 667 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
GPHN-201ENST00000315266 PODXL2Q9NZ53 605 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
GPHN-201ENST00000315266 CPDO75976 1380 aa11.9□□□□□ -0.51
GPHN-201ENST00000315266 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 TTC39AQ5SRH9 613 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
GPHN-201ENST00000315266 DHX16O60231 1041 aaKnown RBP11.89□□□□□ -0.51
GPHN-201ENST00000315266 LMBR1LQ6UX01 489 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
GPHN-201ENST00000315266 JAG2Q9Y219 1238 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 FIBPO43427 364 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
GPHN-201ENST00000315266 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 SLC52A2Q9HAB3 445 aa11.89□□□□□ -0.51
GPHN-201ENST00000315266 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
GPHN-201ENST00000315266 SNRPA1P09661 255 aaKnown RBP11.88□□□□□ -0.51
GPHN-201ENST00000315266 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
GPHN-201ENST00000315266 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
GPHN-201ENST00000315266 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms