RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
RNF4-201ENST00000314289 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
RNF4-201ENST00000314289 K7ELQ4 463 aaPredicted RBP15.18■□□□□ 0.02
RNF4-201ENST00000314289 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 RRAGDQ9NQL2 400 aaPredicted RBP15.18■□□□□ 0.02
RNF4-201ENST00000314289 N4BP2Q86UW6 1770 aaPredicted RBP15.18■□□□□ 0.02
RNF4-201ENST00000314289 NBPF26B4DH59 902 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 REC8O95072 547 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 NBPF10Q6P3W6 841 aaKnown RBP15.18■□□□□ 0.02
RNF4-201ENST00000314289 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
RNF4-201ENST00000314289 UBE3BQ7Z3V4 1068 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 LRP10Q7Z4F1 713 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 NBPF15Q8N660 670 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 ESYT1Q9BSJ8 1104 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 GCKRQ14397 625 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
RNF4-201ENST00000314289 TTLL7Q6ZT98 887 aa15.17■□□□□ 0.02
RNF4-201ENST00000314289 METTL22Q9BUU2 404 aaPredicted RBP15.17■□□□□ 0.02
RNF4-201ENST00000314289 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
RNF4-201ENST00000314289 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
RNF4-201ENST00000314289 AACSQ86V21 672 aa15.16■□□□□ 0.02
RNF4-201ENST00000314289 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
RNF4-201ENST00000314289 ZBTB3Q9H5J0 574 aa15.16■□□□□ 0.02
RNF4-201ENST00000314289 L1TD1Q5T7N2 865 aaKnown RBP15.16■□□□□ 0.02
RNF4-201ENST00000314289 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
RNF4-201ENST00000314289 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
RNF4-201ENST00000314289 A0A0G2JS52 829 aa15.15■□□□□ 0.02
RNF4-201ENST00000314289 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
RNF4-201ENST00000314289 SASH1O94885 1247 aa15.15■□□□□ 0.02
RNF4-201ENST00000314289 A0A087WZG4 1122 aa15.15■□□□□ 0.02
RNF4-201ENST00000314289 MTX1Q13505 466 aa15.15■□□□□ 0.02
RNF4-201ENST00000314289 RABEP1Q15276 862 aa15.15■□□□□ 0.02
RNF4-201ENST00000314289 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
RNF4-201ENST00000314289 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
RNF4-201ENST00000314289 CHMP3Q9Y3E7 222 aa15.14■□□□□ 0.01
RNF4-201ENST00000314289 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.01
RNF4-201ENST00000314289 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
RNF4-201ENST00000314289 ASAP1Q9ULH1 1129 aa15.14■□□□□ 0.01
RNF4-201ENST00000314289 AK9Q5TCS8 1911 aa15.13■□□□□ 0.01
RNF4-201ENST00000314289 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
RNF4-201ENST00000314289 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
RNF4-201ENST00000314289 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
RNF4-201ENST00000314289 ADAMTS2O95450 1211 aa15.13■□□□□ 0.01
RNF4-201ENST00000314289 NEK4P51957 841 aa15.13■□□□□ 0.01
RNF4-201ENST00000314289 UPF3BQ9BZI7 483 aaKnown RBP15.13■□□□□ 0.01
RNF4-201ENST00000314289 MCM4P33991 863 aa15.12■□□□□ 0.01
RNF4-201ENST00000314289 NDUFB9Q9Y6M9 179 aa15.12■□□□□ 0.01
RNF4-201ENST00000314289 DDIT3P35638 169 aa15.12■□□□□ 0.01
RNF4-201ENST00000314289 TNPO1Q92973 898 aaKnown RBP15.12■□□□□ 0.01
RNF4-201ENST00000314289 TMOD3Q9NYL9 352 aa15.12■□□□□ 0.01
RNF4-201ENST00000314289 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
RNF4-201ENST00000314289 PANK2Q9BZ23 570 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 MRC1P22897 1456 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 UTYO14607 1347 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 PKP1Q13835 747 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 BOLA2Q9H3K6 86 aa15.11■□□□□ 0.01
RNF4-201ENST00000314289 XRCC6P12956 609 aaKnown RBP eCLIP15.1■□□□□ 0.01
RNF4-201ENST00000314289 SSFA2P28290 1259 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 CNTROBQ8N137 903 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 PLBD2Q8NHP8 589 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 PIGBQ92521 554 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 ECHDC1Q9NTX5 307 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
RNF4-201ENST00000314289 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
RNF4-201ENST00000314289 LARP6Q9BRS8 491 aaKnown RBP15.1■□□□□ 0.01
RNF4-201ENST00000314289 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
RNF4-201ENST00000314289 ST18O60284 1047 aa15.09■□□□□ 0.01
RNF4-201ENST00000314289 LMBR1LQ6UX01 489 aa15.09■□□□□ 0.01
RNF4-201ENST00000314289 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
RNF4-201ENST00000314289 DTNBO60941 627 aa15.08■□□□□ 0.01
RNF4-201ENST00000314289 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0.01
RNF4-201ENST00000314289 FOXD4L5Q5VV16 416 aaPredicted RBP15.08■□□□□ 0.01
RNF4-201ENST00000314289 FOXD4L4Q8WXT5 416 aaPredicted RBP15.08■□□□□ 0.01
RNF4-201ENST00000314289 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0.01
RNF4-201ENST00000314289 ABCA3Q99758 1704 aa15.08■□□□□ 0.01
RNF4-201ENST00000314289 HDAC5Q9UQL6 1122 aa15.08■□□□□ 0.01
RNF4-201ENST00000314289 NUTM2BA6NNL0 878 aaPredicted RBP15.08■□□□□ 0
RNF4-201ENST00000314289 NUTM2EB1AL46 878 aaPredicted RBP15.08■□□□□ 0
RNF4-201ENST00000314289 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
RNF4-201ENST00000314289 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
RNF4-201ENST00000314289 ABCC6O95255 1503 aa15.08■□□□□ 0
RNF4-201ENST00000314289 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0
RNF4-201ENST00000314289 AOX1Q06278 1338 aa15.08■□□□□ 0
RNF4-201ENST00000314289 TFCP2Q12800 502 aa15.08■□□□□ 0
RNF4-201ENST00000314289 ERC1Q8IUD2 1116 aa15.08■□□□□ 0
RNF4-201ENST00000314289 PIP4K2BP78356 416 aa15.07■□□□□ 0
RNF4-201ENST00000314289 PTPN12Q05209 780 aaKnown RBP15.07■□□□□ 0
RNF4-201ENST00000314289 DIAPH3Q9NSV4 1193 aa15.07■□□□□ 0
RNF4-201ENST00000314289 CHAMP1Q96JM3 812 aa15.07■□□□□ 0
RNF4-201ENST00000314289 GLI3P10071 1580 aa15.06■□□□□ 0
RNF4-201ENST00000314289 SGSM2O43147 1006 aa15.06■□□□□ 0
RNF4-201ENST00000314289 CHGBP05060 677 aa15.06■□□□□ 0
RNF4-201ENST00000314289 CPA1P15085 419 aa15.06■□□□□ 0
RNF4-201ENST00000314289 MCCP23508 829 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms