RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KCNQ3O43525 872 aa10.85□□□□□ -0.67
TPM3-203ENST00000312970 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
TPM3-203ENST00000312970 ECM2O94769 699 aaPredicted RBP10.85□□□□□ -0.67
TPM3-203ENST00000312970 A1BGP04217 495 aa10.85□□□□□ -0.67
TPM3-203ENST00000312970 C16orf71Q8IYS4 520 aaPredicted RBP10.85□□□□□ -0.67
TPM3-203ENST00000312970 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
TPM3-203ENST00000312970 NRXN2Q9P2S2 1712 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 TBC1D9BQ66K14 1250 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 MCM10Q7L590 875 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 C2CD5Q86YS7 1000 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 USP16Q9Y5T5 823 aa10.84□□□□□ -0.67
TPM3-203ENST00000312970 CCDC88AQ3V6T2 1871 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 NEFMP07197 916 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
TPM3-203ENST00000312970 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 SETDB2Q96T68 719 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 BRIP1Q9BX63 1249 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 RNF181Q9P0P0 153 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
TPM3-203ENST00000312970 SIPA1L3O60292 1781 aaPredicted RBP10.82□□□□□ -0.68
TPM3-203ENST00000312970 PDE6BP35913 854 aa10.82□□□□□ -0.68
TPM3-203ENST00000312970 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
TPM3-203ENST00000312970 TAF7Q15545 349 aaPredicted RBP10.82□□□□□ -0.68
TPM3-203ENST00000312970 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
TPM3-203ENST00000312970 TIAM2Q8IVF5 1701 aa10.81□□□□□ -0.68
TPM3-203ENST00000312970 CAMTA2O94983 1202 aa10.81□□□□□ -0.68
TPM3-203ENST00000312970 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
TPM3-203ENST00000312970 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
TPM3-203ENST00000312970 PRR5LQ6MZQ0 368 aa10.81□□□□□ -0.68
TPM3-203ENST00000312970 CLEC4GQ6UXB4 293 aa10.81□□□□□ -0.68
TPM3-203ENST00000312970 ZNF622Q969S3 477 aaKnown RBP eCLIP10.81□□□□□ -0.682e-8■■□□□ 13.4
TPM3-203ENST00000312970 CARMIL3Q8ND23 1372 aa10.8□□□□□ -0.68
TPM3-203ENST00000312970 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
TPM3-203ENST00000312970 NPHP1O15259 732 aa10.8□□□□□ -0.68
TPM3-203ENST00000312970 LMNB1P20700 586 aa10.8□□□□□ -0.68
TPM3-203ENST00000312970 PNNQ9H307 717 aaKnown RBP10.8□□□□□ -0.68
TPM3-203ENST00000312970 SCN7AQ01118 1682 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
TPM3-203ENST00000312970 RASSF7Q02833 373 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
TPM3-203ENST00000312970 MIS18AQ9NYP9 233 aa10.79□□□□□ -0.68
TPM3-203ENST00000312970 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
TPM3-203ENST00000312970 ANKRD31Q8N7Z5 1873 aa10.78□□□□□ -0.68
TPM3-203ENST00000312970 ST5P78524 1137 aa10.78□□□□□ -0.68
TPM3-203ENST00000312970 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
TPM3-203ENST00000312970 ZNF652Q9Y2D9 606 aa10.78□□□□□ -0.68
TPM3-203ENST00000312970 CACNA1SQ13698 1873 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 RGL2O15211 777 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 C21orf2O43822 256 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 SRGNP10124 158 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 STYK1Q6J9G0 422 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
TPM3-203ENST00000312970 TPTE2Q6XPS3 522 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 NBPF5PQ86XG9 351 aaPredicted RBP10.77□□□□□ -0.69
TPM3-203ENST00000312970 NBPF15Q8N660 670 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 CNKSR1Q969H4 720 aa10.77□□□□□ -0.69
TPM3-203ENST00000312970 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.69
TPM3-203ENST00000312970 COL11A2P13942 1736 aaPredicted RBP10.77□□□□□ -0.69
TPM3-203ENST00000312970 NFKBIEO00221 500 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 SLC34A2O95436 690 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
TPM3-203ENST00000312970 FER1L6Q2WGJ9 1857 aa10.76□□□□□ -0.69
TPM3-203ENST00000312970 VEGFAP15692 232 aaPredicted RBP10.75□□□□□ -0.69
TPM3-203ENST00000312970 RALBP1Q15311 655 aa10.75□□□□□ -0.69
TPM3-203ENST00000312970 NIP7Q9Y221 180 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPM3-203ENST00000312970 MAPK8IP3Q9UPT6 1336 aa10.75□□□□□ -0.69
TPM3-203ENST00000312970 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
TPM3-203ENST00000312970 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
TPM3-203ENST00000312970 ERFEQ4G0M1 354 aa10.74□□□□□ -0.69
TPM3-203ENST00000312970 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
TPM3-203ENST00000312970 PRPF40BQ6NWY9 871 aaKnown RBP10.74□□□□□ -0.69
TPM3-203ENST00000312970 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
TPM3-203ENST00000312970 ARFGEF2Q9Y6D5 1785 aa10.74□□□□□ -0.69
TPM3-203ENST00000312970 KLRG2A4D1S0 409 aaPredicted RBP10.73□□□□□ -0.69
TPM3-203ENST00000312970 FAM177BA6PVY3 158 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 POTECB2RU33 542 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 NPR1P16066 1061 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 GTF2E1P29083 439 aaPredicted RBP10.73□□□□□ -0.69
TPM3-203ENST00000312970 HLFQ16534 295 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 THUMPD2Q9BTF0 503 aaKnown RBP10.73□□□□□ -0.69
TPM3-203ENST00000312970 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 LTBP3Q9NS15 1303 aa10.73□□□□□ -0.69
TPM3-203ENST00000312970 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
TPM3-203ENST00000312970 RIPK4P57078 832 aa10.72□□□□□ -0.69
TPM3-203ENST00000312970 C7orf43Q8WVR3 580 aa10.72□□□□□ -0.69
TPM3-203ENST00000312970 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
TPM3-203ENST00000312970 MYL6BP14649 208 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms