RNA–Protein interactions for RNA: ENST00000312373.12

RUNDC3B-201, Transcript of RUN domain containing 3B, humanhuman

TSL 5

Gene RUNDC3B, Length 3,254 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-201ENST00000312373 SIPA1L3O60292 1781 aaPredicted RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 GLRX3O76003 335 aaKnown RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 PDIA6Q15084 440 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 CLASRPQ8N2M8 674 aaKnown RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 SUCLG2Q96I99 432 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 LARP6Q9BRS8 491 aaKnown RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 TRPM3Q9HCF6 1732 aaPredicted RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 RPAP1Q9BWH6 1393 aaPredicted RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 AK2P54819 239 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 PTH1RQ03431 593 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 FOXD4L6Q3SYB3 417 aaPredicted RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 FOXD4L3Q6VB84 417 aaPredicted RBP5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 KRT28Q7Z3Y7 464 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 ECHDC1Q9NTX5 307 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
RUNDC3B-201ENST00000312373 SYCE3A1L190 88 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 SASH1O94885 1247 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 CPA1P15085 419 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 AIMP1Q12904 312 aaKnown RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 SLC39A6Q13433 755 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 LRSAM1Q6UWE0 723 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 RUFY3Q7L099 469 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 LINS1Q8NG48 757 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 GDPD2Q9HCC8 539 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 DDX21Q9NR30 783 aaKnown RBP eCLIP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 HYPKQ9NX55 129 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 UTYO14607 1347 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 ERBB3P21860 1342 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 RGPD5Q99666 1765 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 GRM8O00222 908 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 MBD3O95983 291 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 IGKV5-2P06315 115 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 KIAA1211Q6ZU35 1233 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 BICC1Q9H694 974 aaKnown RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 DIAPH3Q9NSV4 1193 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 LMTK3Q96Q04 1460 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 LARGE1O95461 756 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 IFIT2P09913 472 aaKnown RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 ZC3H6P61129 1189 aaKnown RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 ADCK5Q3MIX3 580 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 AACSQ86V21 672 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 PDLIM2Q96JY6 352 aa5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 WDR33Q9C0J8 1336 aaKnown RBP5.68□□□□□ -1.5
RUNDC3B-201ENST00000312373 KDM6AO15550 1401 aaPredicted RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 C1orf167Q5SNV9 1468 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 ERC1Q8IUD2 1116 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 ANP32BQ92688 251 aaKnown RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 NAP1L5Q96NT1 182 aaPredicted RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 TLR7Q9NYK1 1049 aaKnown RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 LIMCH1Q9UPQ0 1083 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 ADAMTSL3P82987 1691 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 C5P01031 1676 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 DTNBO60941 627 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 CASTP20810 708 aaKnown RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 PRPF40BQ6NWY9 871 aaKnown RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 ZNF790Q6PG37 636 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 USP48Q86UV5 1035 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 PROSER2Q86WR7 435 aaPredicted RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 RUFY2Q8WXA3 655 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 KCNB2Q92953 911 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 EVI5LQ96CN4 794 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 CCDC8Q9H0W5 538 aaPredicted RBP5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 TCHHQ07283 1943 aa5.67□□□□□ -1.5
RUNDC3B-201ENST00000312373 DDX58O95786 925 aaKnown RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 ST3GAL1Q11201 340 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 COL9A3Q14050 684 aaPredicted RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 NECTIN1Q15223 517 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 EPHA10Q5JZY3 1008 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 RIC3Q7Z5B4 369 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 ZSCAN30Q86W11 494 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 KLHDC4Q8TBB5 520 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 FAM227BQ96M60 508 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 SLC52A2Q9HAB3 445 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 HDAC5Q9UQL6 1122 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 NPHP3Q7Z494 1330 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 NEURL1BA8MQ27 555 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 MYL6BP14649 208 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 PHKG2P15735 406 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 SYT1P21579 422 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 G3BP1Q13283 466 aaKnown RBP eCLIP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 TMEM87AQ8NBN3 555 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 NFATC2IPQ8NCF5 419 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 XAGE3Q8WTP9 111 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 DDX17Q92841 729 aaKnown RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 GPATCH3Q96I76 525 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 JAKMIP1Q96N16 626 aaKnown RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 SIL1Q9H173 461 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 ZSWIM6Q9HCJ5 1215 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 CCDC171Q6TFL3 1326 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 MST1RQ04912 1400 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 MEGF6O75095 1541 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 ALS2Q96Q42 1657 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 SCN11AQ9UI33 1791 aa5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 NMIQ13287 307 aaPredicted RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 LARP1Q6PKG0 1096 aaKnown RBP5.66□□□□□ -1.5
RUNDC3B-201ENST00000312373 COPS6Q7L5N1 327 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms