RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PPP1R42Q7Z4L9 355 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 IL17REQ8NFR9 667 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 GNL3LQ9NVN8 582 aaKnown RBP7.24□□□□□ -1.25
SEC22A-201ENST00000309934 CSPP1Q1MSJ5 1256 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 CCDC57Q2TAC2 916 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 CNKSR2Q8WXI2 1034 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 PDCL3Q9H2J4 239 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 KDM2BQ8NHM5 1336 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 SRGAP3O43295 1099 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 TAF3Q5VWG9 929 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 NECTIN2Q92692 538 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 AK7Q96M32 723 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 SPINK5Q9NQ38 1064 aaPredicted RBP7.24□□□□□ -1.25
SEC22A-201ENST00000309934 MAP3K2Q9Y2U5 619 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 TTC41PQ6P2S7 1318 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 CEMIPQ8WUJ3 1361 aa7.24□□□□□ -1.25
SEC22A-201ENST00000309934 RABEP1Q15276 862 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 CCDC158Q5M9N0 1113 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 LNPKQ9C0E8 428 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 GRM8O00222 908 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 GIGYF1O75420 1035 aaPredicted RBP7.23□□□□□ -1.25
SEC22A-201ENST00000309934 PSMA5P28066 241 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 CCDC191Q8NCU4 936 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 METTL22Q9BUU2 404 aaPredicted RBP7.23□□□□□ -1.25
SEC22A-201ENST00000309934 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.23□□□□□ -1.25
SEC22A-201ENST00000309934 SOCS7O14512 581 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 RGL2O15211 777 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 C20orf194Q5TEA3 1177 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 NYXQ9GZU5 481 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 CHPF2Q9P2E5 772 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 PIK3C2AO00443 1686 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 NFAT5O94916 1531 aa7.23□□□□□ -1.25
SEC22A-201ENST00000309934 IBTKQ9P2D0 1353 aaPredicted RBP7.23□□□□□ -1.25
SEC22A-201ENST00000309934 ZNF771Q7L3S4 317 aaPredicted RBP7.22□□□□□ -1.25
SEC22A-201ENST00000309934 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 ADAMTS2O95450 1211 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 NKX1-1Q15270 411 aaPredicted RBP7.22□□□□□ -1.25
SEC22A-201ENST00000309934 TEX2Q8IWB9 1127 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 NFATC2IPQ8NCF5 419 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 CABLES1Q8TDN4 633 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 C22orf23Q9BZE7 217 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 MIS18AQ9NYP9 233 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 CEP126Q9P2H0 1117 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 MYL6BP14649 208 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 MX1P20591 662 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 BARGINQ6ZT62 677 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 TSPYL6Q8N831 410 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 MYD88Q99836 296 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
SEC22A-201ENST00000309934 TRPC5Q9UL62 973 aaPredicted RBP7.21□□□□□ -1.25
SEC22A-201ENST00000309934 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.26
SEC22A-201ENST00000309934 KRT32Q14532 448 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 CEP85Q6P2H3 762 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 UNC5CLQ8IV45 518 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 ATP6V1DQ9Y5K8 247 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 HEG1Q9ULI3 1381 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 PXDNQ92626 1479 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 APBB1O00213 710 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 IGHMBP2P38935 993 aaKnown RBP7.21□□□□□ -1.26
SEC22A-201ENST00000309934 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
SEC22A-201ENST00000309934 CDC5LQ99459 802 aaKnown RBP7.21□□□□□ -1.26
SEC22A-201ENST00000309934 NOL10Q9BSC4 688 aaKnown RBP7.21□□□□□ -1.26
SEC22A-201ENST00000309934 IL15P40933 162 aaPredicted RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 XAGE3Q8WTP9 111 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 RILPL2Q969X0 211 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 LRRFIP2Q9Y608 721 aaKnown RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 ANKRD18BA2A2Z9 1011 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 IGSF3O75054 1194 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 ZPR1O75312 459 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 TPM2P07951 284 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 ATG3Q9NT62 314 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 RAD50Q92878 1312 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 PHRF1Q9P1Y6 1649 aaKnown RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 IFIT5Q13325 482 aaKnown RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 TTF1Q15361 905 aaPredicted RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 ZNF772Q68DY9 489 aaPredicted RBP7.2□□□□□ -1.26
SEC22A-201ENST00000309934 EVI5LQ96CN4 794 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 CTNNA3Q9UI47 895 aa7.2□□□□□ -1.26
SEC22A-201ENST00000309934 TMED8Q6PL24 325 aaPredicted RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 COPS6Q7L5N1 327 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 FLAD1Q8NFF5 587 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 LGR6Q9HBX8 967 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 CIZ1Q9ULV3 898 aaPredicted RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 ERVV-1B6SEH8 477 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 CWC22Q9HCG8 908 aaKnown RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 ECHDC1Q9NTX5 307 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 NUCB2P80303 420 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 PCDHB15Q9Y5E8 787 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 ZFYP08048 801 aaPredicted RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 IL6STP40189 918 aaPredicted RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 ANAPC15P60006 121 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 VPS72Q15906 364 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 SKOR2Q2VWA4 1001 aaPredicted RBP7.19□□□□□ -1.26
SEC22A-201ENST00000309934 CCDC152Q4G0S7 254 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 AXDND1Q5T1B0 1012 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms