RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 SIK1P57059 783 aa17.63■□□□□ 0.41
EIF3F-201ENST00000309828 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
EIF3F-201ENST00000309828 NUCB1Q02818 461 aa17.63■□□□□ 0.41
EIF3F-201ENST00000309828 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
EIF3F-201ENST00000309828 NUP188Q5SRE5 1749 aa17.63■□□□□ 0.41
EIF3F-201ENST00000309828 RREB1Q92766 1687 aa17.62■□□□□ 0.41
EIF3F-201ENST00000309828 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
EIF3F-201ENST00000309828 KCNQ2O43526 872 aa17.62■□□□□ 0.41
EIF3F-201ENST00000309828 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
EIF3F-201ENST00000309828 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
EIF3F-201ENST00000309828 MYD88Q99836 296 aa17.62■□□□□ 0.41
EIF3F-201ENST00000309828 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
EIF3F-201ENST00000309828 GRM8O00222 908 aa17.61■□□□□ 0.41
EIF3F-201ENST00000309828 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
EIF3F-201ENST00000309828 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
EIF3F-201ENST00000309828 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
EIF3F-201ENST00000309828 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
EIF3F-201ENST00000309828 GCKRQ14397 625 aa17.6■□□□□ 0.41
EIF3F-201ENST00000309828 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
EIF3F-201ENST00000309828 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
EIF3F-201ENST00000309828 COL15A1P39059 1388 aa17.6■□□□□ 0.41
EIF3F-201ENST00000309828 RGS3P49796 1198 aa17.59■□□□□ 0.41
EIF3F-201ENST00000309828 MTX1Q13505 466 aa17.59■□□□□ 0.41
EIF3F-201ENST00000309828 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
EIF3F-201ENST00000309828 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
EIF3F-201ENST00000309828 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
EIF3F-201ENST00000309828 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
EIF3F-201ENST00000309828 SSH3Q8TE77 659 aa17.58■□□□□ 0.4
EIF3F-201ENST00000309828 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.4
EIF3F-201ENST00000309828 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
EIF3F-201ENST00000309828 BTAF1O14981 1849 aa17.58■□□□□ 0.4
EIF3F-201ENST00000309828 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 TRIM28Q13263 835 aaKnown RBP17.57■□□□□ 0.4
EIF3F-201ENST00000309828 ITPK1Q13572 414 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 CCDC191Q8NCU4 936 aa17.57■□□□□ 0.4
EIF3F-201ENST00000309828 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
EIF3F-201ENST00000309828 AFDNP55196 1824 aaKnown RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 POLA2Q14181 598 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 KRT27Q7Z3Y8 459 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
EIF3F-201ENST00000309828 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
EIF3F-201ENST00000309828 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
EIF3F-201ENST00000309828 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
EIF3F-201ENST00000309828 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
EIF3F-201ENST00000309828 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
EIF3F-201ENST00000309828 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
EIF3F-201ENST00000309828 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
EIF3F-201ENST00000309828 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
EIF3F-201ENST00000309828 LY75O60449 1722 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 A0A087WZG4 1122 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 H7C1W4 665 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 PDE4AP27815 886 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 HSP90AB4PQ58FF6 505 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
EIF3F-201ENST00000309828 SUCLG2Q96I99 432 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
EIF3F-201ENST00000309828 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 RGL2O15211 777 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 RAB11FIP3O75154 756 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 HMGB2P26583 209 aaKnown RBP17.52■□□□□ 0.4
EIF3F-201ENST00000309828 RXRBP28702 533 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 FAM182BQ5T319 152 aa17.52■□□□□ 0.4
EIF3F-201ENST00000309828 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
EIF3F-201ENST00000309828 UPF1Q92900 1129 aaKnown RBP eCLIP17.52■□□□□ 0.4
EIF3F-201ENST00000309828 CASP7P55210 303 aa17.51■□□□□ 0.39
EIF3F-201ENST00000309828 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
EIF3F-201ENST00000309828 KAZALD1Q96I82 304 aa17.51■□□□□ 0.39
EIF3F-201ENST00000309828 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
EIF3F-201ENST00000309828 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
EIF3F-201ENST00000309828 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
EIF3F-201ENST00000309828 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
EIF3F-201ENST00000309828 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
EIF3F-201ENST00000309828 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
EIF3F-201ENST00000309828 UBE3BQ7Z3V4 1068 aa17.49■□□□□ 0.39
EIF3F-201ENST00000309828 ARXQ96QS3 562 aa17.49■□□□□ 0.39
EIF3F-201ENST00000309828 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
EIF3F-201ENST00000309828 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
EIF3F-201ENST00000309828 CCNL1Q9UK58 526 aaPredicted RBP17.49■□□□□ 0.39
EIF3F-201ENST00000309828 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
EIF3F-201ENST00000309828 SURF6O75683 361 aaKnown RBP17.47■□□□□ 0.39
EIF3F-201ENST00000309828 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
EIF3F-201ENST00000309828 HLFQ16534 295 aa17.47■□□□□ 0.39
EIF3F-201ENST00000309828 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
EIF3F-201ENST00000309828 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
EIF3F-201ENST00000309828 MYH14Q7Z406 1995 aaKnown RBP17.47■□□□□ 0.39
EIF3F-201ENST00000309828 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
EIF3F-201ENST00000309828 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms