RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.36
KLHL3-201ENST00000309755 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.36
KLHL3-201ENST00000309755 RANBP6O60518 1105 aaKnown RBP12.77□□□□□ -0.36
KLHL3-201ENST00000309755 RSPH14Q9UHP6 348 aa12.77□□□□□ -0.36
KLHL3-201ENST00000309755 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 NOP2P46087 812 aaKnown RBP12.77□□□□□ -0.37
KLHL3-201ENST00000309755 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 RAB11FIP4Q86YS3 637 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
KLHL3-201ENST00000309755 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
KLHL3-201ENST00000309755 HSF2BPO75031 334 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 NLRP5P59047 1200 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 MKNK2Q9HBH9 465 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
KLHL3-201ENST00000309755 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
KLHL3-201ENST00000309755 MCM6Q14566 821 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
KLHL3-201ENST00000309755 CTCFLQ8NI51 663 aaPredicted RBP12.76□□□□□ -0.37
KLHL3-201ENST00000309755 STAMBPO95630 424 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC186Q7Z3E2 898 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 DNAI1Q9UI46 699 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 SKILP12757 684 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
KLHL3-201ENST00000309755 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
KLHL3-201ENST00000309755 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 UBASH3AP57075 661 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
KLHL3-201ENST00000309755 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 MYO1BO43795 1136 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
KLHL3-201ENST00000309755 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 CEP112Q8N8E3 955 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 NECAB1Q8N987 351 aa12.75□□□□□ -0.37
KLHL3-201ENST00000309755 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
KLHL3-201ENST00000309755 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 TMEM266Q2M3C6 531 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC40Q4G0X9 1142 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 IGSF3O75054 1194 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
KLHL3-201ENST00000309755 CTNNA2P26232 953 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 ORC3Q9UBD5 711 aaPredicted RBP12.73□□□□□ -0.37
KLHL3-201ENST00000309755 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 IQCA1Q86XH1 822 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 HAND2P61296 217 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 N4BP3O15049 544 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
KLHL3-201ENST00000309755 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
KLHL3-201ENST00000309755 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
KLHL3-201ENST00000309755 IDEP14735 1019 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 HSPA4P34932 840 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
KLHL3-201ENST00000309755 MAP3K12Q12852 859 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
KLHL3-201ENST00000309755 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
KLHL3-201ENST00000309755 DRC1Q96MC2 740 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
KLHL3-201ENST00000309755 DAPK1P53355 1430 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 GOLIM4O00461 696 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 IVLP07476 585 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 TNIP1Q15025 636 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 ZNF287Q9HBT7 754 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 MICU3Q86XE3 530 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
KLHL3-201ENST00000309755 FSD2A1L4K1 749 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CTAGE8P0CG41 777 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 SYKP43405 635 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 TMEM67Q5HYA8 995 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 DNAJC25Q9H1X3 360 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CAVIN2O95810 425 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 AOPEPQ8N6M6 819 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.37
KLHL3-201ENST00000309755 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
KLHL3-201ENST00000309755 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.37
KLHL3-201ENST00000309755 CALML4Q96GE6 196 aa12.71□□□□□ -0.38
KLHL3-201ENST00000309755 A0A087WZG4 1122 aa12.71□□□□□ -0.38
KLHL3-201ENST00000309755 CKAP4Q07065 602 aaKnown RBP12.71□□□□□ -0.38
KLHL3-201ENST00000309755 FAM114A1Q8IWE2 563 aa12.71□□□□□ -0.38
KLHL3-201ENST00000309755 CAPN2P17655 700 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms