RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 SERPINC1P01008 464 aa9.58□□□□□ -0.88
PPARGC1B-201ENST00000309241 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
PPARGC1B-201ENST00000309241 RPAINQ86UA6 219 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 ANO10Q9NW15 660 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 SSFA2P28290 1259 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 DZIP1Q86YF9 867 aaKnown RBP9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 GOLGA4Q13439 2230 aaKnown RBP9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 LRSAM1Q6UWE0 723 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 PPFIA3O75145 1194 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 PRPHP41219 470 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 CYP46A1Q9Y6A2 500 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 ARHGAP29Q52LW3 1261 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 ARFGAP2Q8N6H7 521 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 FANCD2Q9BXW9 1451 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 GNAI2P04899 355 aa9.57□□□□□ -0.88
PPARGC1B-201ENST00000309241 BMP15O95972 392 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 SLF2Q8IX21 1173 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 ZBTB12Q9Y330 459 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 TTC16Q8NEE8 873 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 FAM114A2Q9NRY5 505 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 MYRIPQ8NFW9 859 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 UBA5Q9GZZ9 404 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 NUP62CLQ9H1M0 184 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 NEK4P51957 841 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 ATL3Q6DD88 541 aa9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 ZNF830Q96NB3 372 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1B-201ENST00000309241 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 HSPA4P34932 840 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 SREK1Q8WXA9 508 aaKnown RBP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 TAF4BQ92750 862 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CAVIN4Q5BKX8 364 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 PPP2R5AQ15172 486 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 RPAP2Q8IXW5 612 aaPredicted RBP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 AIDAQ96BJ3 306 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CCDC196A0A1B0GTZ2 297 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.884e-8■■■■□ 25.9
PPARGC1B-201ENST00000309241 ALDH1L2Q3SY69 923 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 TACO1Q9BSH4 297 aaKnown RBP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CTAGE1Q96RT6 745 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 RPGRIP1LQ68CZ1 1315 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 KIF3CO14782 793 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 IQCDQ96DY2 449 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 ABCF2Q9UG63 623 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 MACROD2A1Z1Q3 448 aa9.55□□□□□ -0.88
PPARGC1B-201ENST00000309241 CCDC175P0C221 793 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 STK3Q13188 491 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 TMOD3Q9NYL9 352 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 AACSQ86V21 672 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 GAPVD1Q14C86 1478 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 USO1O60763 962 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 CASQ1P31415 396 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 POTEDQ86YR6 584 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 MIPOL1Q8TD10 442 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 KIAA1107Q9UPP5 1409 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 NOP2P46087 812 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 LRRC27Q9C0I9 530 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 CEP83Q9Y592 693 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 IDH1O75874 414 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 SEPT6Q14141 434 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 ANKRD50Q9ULJ7 1429 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 RAB11FIP3O75154 756 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 EIF5P55010 431 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 CAMK4Q16566 473 aa9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
PPARGC1B-201ENST00000309241 HMGXB3Q12766 1538 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 SNW1Q13573 536 aaKnown RBP9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 TMEM132EQ6IEE7 984 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 PIK3R5Q8WYR1 880 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 TRMT1Q9NXH9 659 aaKnown RBP9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 METTL24Q5JXM2 366 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 OPA1O60313 960 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 RNF168Q8IYW5 571 aaPredicted RBP9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 ARFGAP3Q9NP61 516 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 CEP112Q8N8E3 955 aa9.53□□□□□ -0.88
PPARGC1B-201ENST00000309241 B4GALNT4Q76KP1 1039 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms