RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 PDE1AP54750 535 aa10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 SNAP23O00161 211 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 GSPT1P15170 499 aaKnown RBP10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 GZF1Q9H116 711 aaPredicted RBP10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 GCKRQ14397 625 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 CCDC57Q2TAC2 916 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 CNNM1Q9NRU3 951 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 NEURL1BA8MQ27 555 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 FRAT2O75474 233 aaPredicted RBP10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 HLFQ16534 295 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
LCLAT1-201ENST00000309052 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 MARCH10Q8NA82 808 aaPredicted RBP10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 FGD1P98174 961 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 NRKQ7Z2Y5 1582 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 CAMTA1Q9Y6Y1 1673 aa10.5□□□□□ -0.73
LCLAT1-201ENST00000309052 CHMP4CQ96CF2 233 aa10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 CEMIPQ8WUJ3 1361 aa10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 ADCY9O60503 1353 aa10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 PDIA6Q15084 440 aa10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 NIP7Q9Y221 180 aaKnown RBP eCLIP10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 KDM6AO15550 1401 aaPredicted RBP10.49□□□□□ -0.73
LCLAT1-201ENST00000309052 UTRNP46939 3433 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 ERVV-2B6SEH9 535 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 GPATCH3Q96I76 525 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 TCEANC2Q96MN5 208 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 TFCP2Q12800 502 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 PUS3Q9BZE2 481 aaKnown RBP10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 JAG2Q9Y219 1238 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 RGPD2P0DJD1 1756 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 LOC102724428A0A0B4J2F2 783 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 NEK4P51957 841 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 SIK1P57059 783 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 ANKRD26Q9UPS8 1709 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 KDM4AO75164 1064 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 SLFNL1Q499Z3 407 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
LCLAT1-201ENST00000309052 GNPATO15228 680 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 CHGBP05060 677 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 BMP2KLQ5H9B9 411 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 LRRC24Q50LG9 513 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 LTN1O94822 1766 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 PLBD2Q8NHP8 589 aa10.47□□□□□ -0.73
LCLAT1-201ENST00000309052 TRIM37O94972 964 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 CPA1P15085 419 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 EAF2Q96CJ1 260 aaPredicted RBP10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 NFAT5O94916 1531 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 HOXB7P09629 217 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 HSP90AB4PQ58FF6 505 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 METTL24Q5JXM2 366 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.73
LCLAT1-201ENST00000309052 TBC1D2Q9BYX2 928 aa10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 AFF2P51816 1311 aa10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 ALDH1L1O75891 902 aa10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 IFIT5Q13325 482 aaKnown RBP10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 BABAM1Q9NWV8 329 aa10.46□□□□□ -0.74
LCLAT1-201ENST00000309052 TAF5LO75529 589 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 CRKLP46109 303 aaKnown RBP10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 FOSBP53539 338 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 SRP68Q9UHB9 627 aaKnown RBP10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 RGPD5Q99666 1765 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 GOLIM4O00461 696 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 APPP05067 770 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 STRCP1A6NGW2 1772 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 IRS4O14654 1257 aaPredicted RBP10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 COL5A2P05997 1499 aaPredicted RBP10.45□□□□□ -0.74
LCLAT1-201ENST00000309052 CNTROBQ8N137 903 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms