RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 BICC1Q9H694 974 aaKnown RBP29.56■■■□□ 2.32
RFWD2-201ENST00000308769 DEKP35659 375 aaKnown RBP29.56■■■□□ 2.32
RFWD2-201ENST00000308769 HSP90AB4PQ58FF6 505 aa29.56■■■□□ 2.32
RFWD2-201ENST00000308769 ERC2O15083 957 aa29.55■■■□□ 2.32
RFWD2-201ENST00000308769 OS9Q13438 667 aaPredicted RBP29.55■■■□□ 2.32
RFWD2-201ENST00000308769 UNC5CLQ8IV45 518 aa29.55■■■□□ 2.32
RFWD2-201ENST00000308769 BTG4Q9NY30 223 aa29.55■■■□□ 2.32
RFWD2-201ENST00000308769 PA2G4Q9UQ80 394 aaKnown RBP29.55■■■□□ 2.32
RFWD2-201ENST00000308769 REC8O95072 547 aa29.54■■■□□ 2.32
RFWD2-201ENST00000308769 GCKRQ14397 625 aa29.53■■■□□ 2.32
RFWD2-201ENST00000308769 PI4K2BQ8TCG2 481 aa29.51■■■□□ 2.32
RFWD2-201ENST00000308769 COL14A1Q05707 1796 aaKnown RBP29.51■■■□□ 2.32
RFWD2-201ENST00000308769 NBPF26B4DH59 902 aa29.5■■■□□ 2.31
RFWD2-201ENST00000308769 PTCD1O75127 700 aaKnown RBP29.5■■■□□ 2.31
RFWD2-201ENST00000308769 NBPF14Q5TI25 921 aa29.5■■■□□ 2.31
RFWD2-201ENST00000308769 NBPF10Q6P3W6 841 aaKnown RBP29.5■■■□□ 2.31
RFWD2-201ENST00000308769 NBPF15Q8N660 670 aa29.5■■■□□ 2.31
RFWD2-201ENST00000308769 CHMLP26374 656 aa29.49■■■□□ 2.31
RFWD2-201ENST00000308769 ESYT1Q9BSJ8 1104 aa29.49■■■□□ 2.31
RFWD2-201ENST00000308769 COL16A1Q07092 1604 aaPredicted RBP29.49■■■□□ 2.31
RFWD2-201ENST00000308769 AHDC1Q5TGY3 1603 aaPredicted RBP29.49■■■□□ 2.31
RFWD2-201ENST00000308769 MAP4K4O95819 1239 aaPredicted RBP29.48■■■□□ 2.31
RFWD2-201ENST00000308769 NUP188Q5SRE5 1749 aa29.48■■■□□ 2.31
RFWD2-201ENST00000308769 TNS2Q63HR2 1409 aa29.48■■■□□ 2.31
RFWD2-201ENST00000308769 COL22A1Q8NFW1 1626 aaPredicted RBP29.47■■■□□ 2.31
RFWD2-201ENST00000308769 RABEP1Q15276 862 aa29.47■■■□□ 2.31
RFWD2-201ENST00000308769 ERBB4Q15303 1308 aa29.46■■■□□ 2.31
RFWD2-201ENST00000308769 ATP5J2-PTCD1G3V325 749 aa29.46■■■□□ 2.31
RFWD2-201ENST00000308769 K7ELQ4 463 aaPredicted RBP29.46■■■□□ 2.31
RFWD2-201ENST00000308769 EPHA10Q5JZY3 1008 aa29.46■■■□□ 2.31
RFWD2-201ENST00000308769 PLBD2Q8NHP8 589 aa29.46■■■□□ 2.31
RFWD2-201ENST00000308769 JARID2Q92833 1246 aaPredicted RBP29.46■■■□□ 2.31
RFWD2-201ENST00000308769 ITGB4P16144 1822 aa29.46■■■□□ 2.31
RFWD2-201ENST00000308769 CLASRPQ8N2M8 674 aaKnown RBP29.45■■■□□ 2.31
RFWD2-201ENST00000308769 CHMP5Q9NZZ3 219 aa29.45■■■□□ 2.31
RFWD2-201ENST00000308769 ERC1Q8IUD2 1116 aa29.45■■■□□ 2.3
RFWD2-201ENST00000308769 A1BGP04217 495 aa29.44■■■□□ 2.3
RFWD2-201ENST00000308769 USP42Q9H9J4 1324 aaKnown RBP29.43■■■□□ 2.3
RFWD2-201ENST00000308769 DDIT3P35638 169 aa29.43■■■□□ 2.3
RFWD2-201ENST00000308769 TMOD3Q9NYL9 352 aa29.43■■■□□ 2.3
RFWD2-201ENST00000308769 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.43■■■□□ 2.3
RFWD2-201ENST00000308769 UBE3BQ7Z3V4 1068 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 KLHDC4Q8TBB5 520 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 SASH1O94885 1247 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 TTLL7Q6ZT98 887 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 SIL1Q9H173 461 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 KAT6BQ8WYB5 2073 aa29.42■■■□□ 2.3
RFWD2-201ENST00000308769 TTC41PQ6P2S7 1318 aa29.41■■■□□ 2.3
RFWD2-201ENST00000308769 DISP2A7MBM2 1401 aa29.41■■■□□ 2.3
RFWD2-201ENST00000308769 PLCH1Q4KWH8 1693 aa29.41■■■□□ 2.3
RFWD2-201ENST00000308769 IL25Q9H293 177 aa29.41■■■□□ 2.3
RFWD2-201ENST00000308769 LTBP4Q8N2S1 1624 aa29.4■■■□□ 2.3
RFWD2-201ENST00000308769 G3BP1Q13283 466 aaKnown RBP eCLIP29.4■■■□□ 2.3
RFWD2-201ENST00000308769 A0A087WZG4 1122 aa29.39■■■□□ 2.3
RFWD2-201ENST00000308769 ANO2Q9NQ90 1003 aa29.39■■■□□ 2.3
RFWD2-201ENST00000308769 FOXD4L1Q9NU39 408 aa29.39■■■□□ 2.3
RFWD2-201ENST00000308769 WNK3Q9BYP7 1800 aa29.39■■■□□ 2.3
RFWD2-201ENST00000308769 AACSQ86V21 672 aa29.39■■■□□ 2.3
RFWD2-201ENST00000308769 HSP90AA1P07900 732 aaKnown RBP29.38■■■□□ 2.29
RFWD2-201ENST00000308769 IFIT2P09913 472 aaKnown RBP29.38■■■□□ 2.29
RFWD2-201ENST00000308769 TJP1Q07157 1748 aa29.38■■■□□ 2.29
RFWD2-201ENST00000308769 GLRX3O76003 335 aaKnown RBP29.38■■■□□ 2.29
RFWD2-201ENST00000308769 CNTROBQ8N137 903 aa29.38■■■□□ 2.29
RFWD2-201ENST00000308769 PIGBQ92521 554 aa29.37■■■□□ 2.29
RFWD2-201ENST00000308769 ASAP1Q9ULH1 1129 aa29.37■■■□□ 2.29
RFWD2-201ENST00000308769 ECHDC1Q9NTX5 307 aa29.36■■■□□ 2.29
RFWD2-201ENST00000308769 CASP7P55210 303 aa29.36■■■□□ 2.29
RFWD2-201ENST00000308769 EAF2Q96CJ1 260 aaPredicted RBP29.35■■■□□ 2.29
RFWD2-201ENST00000308769 COL15A1P39059 1388 aa29.35■■■□□ 2.29
RFWD2-201ENST00000308769 ZBTB3Q9H5J0 574 aa29.35■■■□□ 2.29
RFWD2-201ENST00000308769 PHLPP1O60346 1717 aa29.35■■■□□ 2.29
RFWD2-201ENST00000308769 RABL6Q3YEC7 729 aaPredicted RBP29.34■■■□□ 2.29
RFWD2-201ENST00000308769 GPATCH3Q96I76 525 aa29.34■■■□□ 2.29
RFWD2-201ENST00000308769 RFX5P48382 616 aaPredicted RBP29.33■■■□□ 2.29
RFWD2-201ENST00000308769 PALD1Q9ULE6 856 aa29.33■■■□□ 2.29
RFWD2-201ENST00000308769 CCDC8Q9H0W5 538 aaPredicted RBP29.32■■■□□ 2.28
RFWD2-201ENST00000308769 TLR7Q9NYK1 1049 aaKnown RBP29.32■■■□□ 2.28
RFWD2-201ENST00000308769 ST18O60284 1047 aa29.32■■■□□ 2.28
RFWD2-201ENST00000308769 COPRSQ9NQ92 184 aa29.31■■■□□ 2.28
RFWD2-201ENST00000308769 ATG3Q9NT62 314 aa29.31■■■□□ 2.28
RFWD2-201ENST00000308769 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.31■■■□□ 2.28
RFWD2-201ENST00000308769 MCCP23508 829 aa29.3■■■□□ 2.28
RFWD2-201ENST00000308769 PTPN12Q05209 780 aaKnown RBP29.3■■■□□ 2.28
RFWD2-201ENST00000308769 CWC25Q9NXE8 425 aaPredicted RBP29.3■■■□□ 2.28
RFWD2-201ENST00000308769 CIZ1Q9ULV3 898 aaPredicted RBP29.3■■■□□ 2.28
RFWD2-201ENST00000308769 SGSM2O43147 1006 aa29.29■■■□□ 2.28
RFWD2-201ENST00000308769 DNAJC10Q8IXB1 793 aa29.29■■■□□ 2.28
RFWD2-201ENST00000308769 H7C1W4 665 aa29.29■■■□□ 2.28
RFWD2-201ENST00000308769 GSE1Q14687 1217 aa29.29■■■□□ 2.28
RFWD2-201ENST00000308769 ZNF330Q9Y3S2 320 aaPredicted RBP29.29■■■□□ 2.28
RFWD2-201ENST00000308769 LRP6O75581 1613 aa29.28■■■□□ 2.28
RFWD2-201ENST00000308769 BCL9O00512 1426 aa29.27■■■□□ 2.28
RFWD2-201ENST00000308769 ADAMTS2O95450 1211 aa29.27■■■□□ 2.28
RFWD2-201ENST00000308769 CWC27Q6UX04 472 aaKnown RBP29.27■■■□□ 2.28
RFWD2-201ENST00000308769 NRAPQ86VF7 1730 aa29.27■■■□□ 2.28
RFWD2-201ENST00000308769 MCM4P33991 863 aa29.27■■■□□ 2.28
RFWD2-201ENST00000308769 LMBR1LQ6UX01 489 aa29.27■■■□□ 2.28
RFWD2-201ENST00000308769 FOXO4P98177 505 aa29.26■■■□□ 2.27
RFWD2-201ENST00000308769 VSIG10Q8N0Z9 540 aa29.26■■■□□ 2.27
RFWD2-201ENST00000308769 DOT1LQ8TEK3 1739 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms