RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 SYT17Q9BSW7 474 aa14.82□□□□□ -0.04
TRIM40-205ENST00000307859 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
TRIM40-205ENST00000307859 CASZ1Q86V15 1759 aa14.82□□□□□ -0.04
TRIM40-205ENST00000307859 ALDH1L1O75891 902 aa14.81□□□□□ -0.04
TRIM40-205ENST00000307859 DDX58O95786 925 aaKnown RBP14.81□□□□□ -0.04
TRIM40-205ENST00000307859 UBTFL1P0CB47 393 aaPredicted RBP14.81□□□□□ -0.04
TRIM40-205ENST00000307859 MAP3K2Q9Y2U5 619 aa14.81□□□□□ -0.04
TRIM40-205ENST00000307859 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
TRIM40-205ENST00000307859 THRAP3Q9Y2W1 955 aaKnown RBP14.81□□□□□ -0.04
TRIM40-205ENST00000307859 USP16Q9Y5T5 823 aa14.81□□□□□ -0.04
TRIM40-205ENST00000307859 CDCA7Q9BWT1 371 aaPredicted RBP14.8□□□□□ -0.04
TRIM40-205ENST00000307859 LRRFIP2Q9Y608 721 aaKnown RBP14.8□□□□□ -0.04
TRIM40-205ENST00000307859 RGPD3A6NKT7 1758 aaPredicted RBP14.79□□□□□ -0.04
TRIM40-205ENST00000307859 RGPD4Q7Z3J3 1758 aa14.79□□□□□ -0.04
TRIM40-205ENST00000307859 FHDC1Q9C0D6 1143 aaPredicted RBP14.79□□□□□ -0.04
TRIM40-205ENST00000307859 LINS1Q8NG48 757 aa14.78□□□□□ -0.04
TRIM40-205ENST00000307859 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-205ENST00000307859 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
TRIM40-205ENST00000307859 TJP1Q07157 1748 aa14.78□□□□□ -0.04
TRIM40-205ENST00000307859 PNMA6EA0A0J9YXQ4 647 aa14.77□□□□□ -0.04
TRIM40-205ENST00000307859 MSH5O43196 834 aa14.77□□□□□ -0.04
TRIM40-205ENST00000307859 BMP2KLQ5H9B9 411 aa14.77□□□□□ -0.04
TRIM40-205ENST00000307859 XAGE3Q8WTP9 111 aa14.77□□□□□ -0.04
TRIM40-205ENST00000307859 BCL9O00512 1426 aa14.77□□□□□ -0.04
TRIM40-205ENST00000307859 UTYO14607 1347 aa14.77□□□□□ -0.05
TRIM40-205ENST00000307859 ZBTB7AO95365 584 aa14.77□□□□□ -0.05
TRIM40-205ENST00000307859 NBPF7P0C2Y1 421 aaPredicted RBP14.77□□□□□ -0.05
TRIM40-205ENST00000307859 MYL6BP14649 208 aa14.77□□□□□ -0.05
TRIM40-205ENST00000307859 NPM2Q86SE8 214 aaKnown RBP14.77□□□□□ -0.05
TRIM40-205ENST00000307859 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
TRIM40-205ENST00000307859 IPO9Q96P70 1041 aaKnown RBP14.77□□□□□ -0.05
TRIM40-205ENST00000307859 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
TRIM40-205ENST00000307859 EXOC5O00471 708 aa14.76□□□□□ -0.05
TRIM40-205ENST00000307859 AIMP1Q12904 312 aaKnown RBP14.76□□□□□ -0.05
TRIM40-205ENST00000307859 POLA2Q14181 598 aa14.76□□□□□ -0.05
TRIM40-205ENST00000307859 COPS6Q7L5N1 327 aa14.76□□□□□ -0.05
TRIM40-205ENST00000307859 RIC3Q7Z5B4 369 aa14.75□□□□□ -0.05
TRIM40-205ENST00000307859 PLEKHM2Q8IWE5 1019 aa14.75□□□□□ -0.05
TRIM40-205ENST00000307859 PIGBQ92521 554 aa14.75□□□□□ -0.05
TRIM40-205ENST00000307859 METTL22Q9BUU2 404 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-205ENST00000307859 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-205ENST00000307859 HDAC5Q9UQL6 1122 aa14.75□□□□□ -0.05
TRIM40-205ENST00000307859 AK9Q5TCS8 1911 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 NBPF26B4DH59 902 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 SEC24BO95487 1268 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 MTX1Q13505 466 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 CWF19L2Q2TBE0 894 aaKnown RBP14.74□□□□□ -0.05
TRIM40-205ENST00000307859 NBPF10Q6P3W6 841 aaKnown RBP14.74□□□□□ -0.05
TRIM40-205ENST00000307859 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 NBPF15Q8N660 670 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
TRIM40-205ENST00000307859 ANKRD36CQ5JPF3 1778 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 IGKV5-2P06315 115 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 ANKRD13DQ6ZTN6 518 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
TRIM40-205ENST00000307859 MTFR1LQ9H019 292 aa14.74□□□□□ -0.05
TRIM40-205ENST00000307859 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 GRM8O00222 908 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 PTCD1O75127 700 aaKnown RBP14.73□□□□□ -0.05
TRIM40-205ENST00000307859 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 BCL11BQ9C0K0 894 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-205ENST00000307859 ATG3Q9NT62 314 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 C9orf78Q9NZ63 289 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-205ENST00000307859 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
TRIM40-205ENST00000307859 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-205ENST00000307859 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-205ENST00000307859 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-205ENST00000307859 ASAP1Q9ULH1 1129 aa14.72□□□□□ -0.05
TRIM40-205ENST00000307859 DDB1Q16531 1140 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 TTC22Q5TAA0 569 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 MYD88Q99836 296 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 TEX13AQ9BXU3 409 aaPredicted RBP14.71□□□□□ -0.05
TRIM40-205ENST00000307859 LRRCC1Q9C099 1032 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 STK32BQ9NY57 414 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 COL15A1P39059 1388 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
TRIM40-205ENST00000307859 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.06
TRIM40-205ENST00000307859 APBB1O00213 710 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 SRGAP3O43295 1099 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 GSPT1P15170 499 aaKnown RBP14.7□□□□□ -0.06
TRIM40-205ENST00000307859 GCKRQ14397 625 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 OTUD7AQ8TE49 926 aaPredicted RBP14.7□□□□□ -0.06
TRIM40-205ENST00000307859 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 OSBPL3Q9H4L5 887 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 NUP98P52948 1817 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 RAB11FIP3O75154 756 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 A1BGP04217 495 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 PROM2Q8N271 834 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 ARXQ96QS3 562 aa14.7□□□□□ -0.06
TRIM40-205ENST00000307859 UPF2Q9HAU5 1272 aaKnown RBP14.7□□□□□ -0.06
TRIM40-205ENST00000307859 SLC15A2Q16348 729 aa14.69□□□□□ -0.06
TRIM40-205ENST00000307859 GPR162Q16538 588 aa14.69□□□□□ -0.06
TRIM40-205ENST00000307859 SUCLG2Q96I99 432 aa14.69□□□□□ -0.06
TRIM40-205ENST00000307859 TBC1D32Q96NH3 1257 aa14.69□□□□□ -0.06
TRIM40-205ENST00000307859 NOP58Q9Y2X3 529 aaKnown RBP14.69□□□□□ -0.06
TRIM40-205ENST00000307859 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms