RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 CRKLP46109 303 aaKnown RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 RPAP2Q8IXW5 612 aaPredicted RBP9.18□□□□□ -0.94
CDC40-201ENST00000307731 PLBD2Q8NHP8 589 aa9.18□□□□□ -0.94
CDC40-201ENST00000307731 PLEKHG2Q9H7P9 1386 aa9.17□□□□□ -0.94
CDC40-201ENST00000307731 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
CDC40-201ENST00000307731 LNPKQ9C0E8 428 aa9.17□□□□□ -0.94
CDC40-201ENST00000307731 NIP7Q9Y221 180 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC40-201ENST00000307731 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
CDC40-201ENST00000307731 TRAPPC3LQ5T215 181 aa9.17□□□□□ -0.94
CDC40-201ENST00000307731 TTLL7Q6ZT98 887 aa9.17□□□□□ -0.94
CDC40-201ENST00000307731 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 GRM8O00222 908 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 PPP1R42Q7Z4L9 355 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 SIL1Q9H173 461 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 PARP4Q9UKK3 1724 aaKnown RBP9.16□□□□□ -0.94
CDC40-201ENST00000307731 DLG5Q8TDM6 1919 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 CCDC57Q2TAC2 916 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
CDC40-201ENST00000307731 STK32BQ9NY57 414 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 LRP6O75581 1613 aa9.16□□□□□ -0.94
CDC40-201ENST00000307731 LMO7Q8WWI1 1683 aa9.15□□□□□ -0.94
CDC40-201ENST00000307731 BCL9LQ86UU0 1499 aa9.15□□□□□ -0.94
CDC40-201ENST00000307731 INTS3Q68E01 1043 aaKnown RBP9.15□□□□□ -0.94
CDC40-201ENST00000307731 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
CDC40-201ENST00000307731 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.94
CDC40-201ENST00000307731 IL6STP40189 918 aaPredicted RBP9.15□□□□□ -0.94
CDC40-201ENST00000307731 ERICH6Q7L0X2 663 aa9.15□□□□□ -0.94
CDC40-201ENST00000307731 NBPF5PQ86XG9 351 aaPredicted RBP9.15□□□□□ -0.94
CDC40-201ENST00000307731 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.95
CDC40-201ENST00000307731 NBPF14Q5TI25 921 aa9.15□□□□□ -0.95
CDC40-201ENST00000307731 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.95
CDC40-201ENST00000307731 GCC1Q96CN9 775 aa9.15□□□□□ -0.95
CDC40-201ENST00000307731 CNNM1Q9NRU3 951 aa9.14□□□□□ -0.95
CDC40-201ENST00000307731 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
CDC40-201ENST00000307731 ABCC4O15439 1325 aa9.14□□□□□ -0.95
CDC40-201ENST00000307731 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
CDC40-201ENST00000307731 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
CDC40-201ENST00000307731 CLASRPQ8N2M8 674 aaKnown RBP9.14□□□□□ -0.95
CDC40-201ENST00000307731 PPP1R1BQ9UD71 204 aaPredicted RBP9.14□□□□□ -0.95
CDC40-201ENST00000307731 MARF1Q9Y4F3 1742 aaKnown RBP9.14□□□□□ -0.95
CDC40-201ENST00000307731 FRAT2O75474 233 aaPredicted RBP9.13□□□□□ -0.95
CDC40-201ENST00000307731 KCNJ4P48050 445 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 MPHOSPH8Q99549 860 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 RGPD1P0DJD0 1748 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
CDC40-201ENST00000307731 NEUROD6Q96NK8 337 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 ERC1Q8IUD2 1116 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
CDC40-201ENST00000307731 BCL9O00512 1426 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 MAP3K15Q6ZN16 1313 aa9.13□□□□□ -0.95
CDC40-201ENST00000307731 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
CDC40-201ENST00000307731 G3V3G9 751 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 DCAF8Q5TAQ9 597 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 CCDC191Q8NCU4 936 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 ZBTB40Q9NUA8 1239 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 PLCH1Q4KWH8 1693 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
CDC40-201ENST00000307731 IFIT5Q13325 482 aaKnown RBP9.12□□□□□ -0.95
CDC40-201ENST00000307731 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 COL18A1P39060 1754 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 GCKRQ14397 625 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 LMBR1LQ6UX01 489 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 FAM89AQ96GI7 184 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 LRRCC1Q9C099 1032 aa9.12□□□□□ -0.95
CDC40-201ENST00000307731 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 IGHMBP2P38935 993 aaKnown RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 IL1RAPL2Q9NP60 686 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 ABCA3Q99758 1704 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 IRS4O14654 1257 aaPredicted RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 BEND3Q5T5X7 828 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 USPL1Q5W0Q7 1092 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 TPTE2Q6XPS3 522 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 NYXQ9GZU5 481 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 ANP32AP39687 249 aaKnown RBP9.11□□□□□ -0.95
CDC40-201ENST00000307731 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 SH3TC1Q8TE82 1336 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 ATRNO75882 1429 aa9.11□□□□□ -0.95
CDC40-201ENST00000307731 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 RPS6KA4O75676 772 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 ST5P78524 1137 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 ITPK1Q13572 414 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
CDC40-201ENST00000307731 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
CDC40-201ENST00000307731 CEP85Q6P2H3 762 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms