RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
COL4A3-201ENST00000304990 MAP2K1Q02750 393 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-201ENST00000304990 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
COL4A3-201ENST00000304990 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
COL4A3-201ENST00000304990 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-201ENST00000304990 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
COL4A3-201ENST00000304990 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
COL4A3-201ENST00000304990 MRC1P22897 1456 aa13.72□□□□□ -0.21
COL4A3-201ENST00000304990 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
COL4A3-201ENST00000304990 HSPA8P11142 646 aaKnown RBP13.71□□□□□ -0.21
COL4A3-201ENST00000304990 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-201ENST00000304990 MASTLQ96GX5 879 aa13.71□□□□□ -0.21
COL4A3-201ENST00000304990 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
COL4A3-201ENST00000304990 PANK3Q9H999 370 aa13.71□□□□□ -0.21
COL4A3-201ENST00000304990 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
COL4A3-201ENST00000304990 HMOX1P09601 288 aa13.7□□□□□ -0.22
COL4A3-201ENST00000304990 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
COL4A3-201ENST00000304990 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
COL4A3-201ENST00000304990 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-201ENST00000304990 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
COL4A3-201ENST00000304990 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-201ENST00000304990 SRGNP10124 158 aa13.69□□□□□ -0.22
COL4A3-201ENST00000304990 EPHX2P34913 555 aa13.69□□□□□ -0.22
COL4A3-201ENST00000304990 IL13P35225 146 aa13.69□□□□□ -0.22
COL4A3-201ENST00000304990 GRM1Q13255 1194 aa13.69□□□□□ -0.22
COL4A3-201ENST00000304990 PNMA8AQ86V59 439 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-201ENST00000304990 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
COL4A3-201ENST00000304990 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
COL4A3-201ENST00000304990 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
COL4A3-201ENST00000304990 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-201ENST00000304990 ZNF541Q9H0D2 1346 aa13.67□□□□□ -0.22
COL4A3-201ENST00000304990 FKBP4Q02790 459 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL4A3-201ENST00000304990 TEFQ10587 303 aa13.67□□□□□ -0.22
COL4A3-201ENST00000304990 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-201ENST00000304990 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-201ENST00000304990 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-201ENST00000304990 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
COL4A3-201ENST00000304990 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-201ENST00000304990 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 KNSTRNQ9Y448 316 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
COL4A3-201ENST00000304990 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
COL4A3-201ENST00000304990 ECE1P42892 770 aa13.65□□□□□ -0.22
COL4A3-201ENST00000304990 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
COL4A3-201ENST00000304990 RTKN2Q8IZC4 609 aa13.65□□□□□ -0.22
COL4A3-201ENST00000304990 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.22
COL4A3-201ENST00000304990 A1BGP04217 495 aa13.64□□□□□ -0.23
COL4A3-201ENST00000304990 NPR1P16066 1061 aa13.64□□□□□ -0.23
COL4A3-201ENST00000304990 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
COL4A3-201ENST00000304990 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
COL4A3-201ENST00000304990 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
COL4A3-201ENST00000304990 CAMTA2O94983 1202 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
COL4A3-201ENST00000304990 ZNF790Q6PG37 636 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 CAPNS2Q96L46 248 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
COL4A3-201ENST00000304990 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
COL4A3-201ENST00000304990 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
COL4A3-201ENST00000304990 GPC2Q8N158 579 aa13.62□□□□□ -0.23
COL4A3-201ENST00000304990 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
COL4A3-201ENST00000304990 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
COL4A3-201ENST00000304990 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL4A3-201ENST00000304990 DIAPH1O60610 1272 aaKnown RBP13.61□□□□□ -0.23
COL4A3-201ENST00000304990 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
COL4A3-201ENST00000304990 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
COL4A3-201ENST00000304990 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
COL4A3-201ENST00000304990 TSKSQ9UJT2 592 aa13.61□□□□□ -0.23
COL4A3-201ENST00000304990 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
COL4A3-201ENST00000304990 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
COL4A3-201ENST00000304990 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
COL4A3-201ENST00000304990 ALDH1B1P30837 517 aa13.6□□□□□ -0.23
COL4A3-201ENST00000304990 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL4A3-201ENST00000304990 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
COL4A3-201ENST00000304990 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
COL4A3-201ENST00000304990 FZD9O00144 591 aa13.59□□□□□ -0.23
COL4A3-201ENST00000304990 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
COL4A3-201ENST00000304990 RGS19P49795 217 aa13.59□□□□□ -0.23
COL4A3-201ENST00000304990 GAS2L2Q8NHY3 880 aa13.59□□□□□ -0.23
COL4A3-201ENST00000304990 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
COL4A3-201ENST00000304990 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
COL4A3-201ENST00000304990 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL4A3-201ENST00000304990 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
COL4A3-201ENST00000304990 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
COL4A3-201ENST00000304990 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A3-201ENST00000304990 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
COL4A3-201ENST00000304990 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
COL4A3-201ENST00000304990 AOC2O75106 756 aa13.56□□□□□ -0.24
COL4A3-201ENST00000304990 MAP2K2P36507 400 aa13.56□□□□□ -0.24
COL4A3-201ENST00000304990 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
COL4A3-201ENST00000304990 MCOLN1Q9GZU1 580 aa13.56□□□□□ -0.24
COL4A3-201ENST00000304990 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 TRAF5O00463 557 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 CA12O43570 354 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 EPS15P42566 896 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms