RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 HDGFL1Q5TGJ6 251 aa17.39■□□□□ 0.37
RAB40A-201ENST00000304236 ST18O60284 1047 aa17.38■□□□□ 0.37
RAB40A-201ENST00000304236 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
RAB40A-201ENST00000304236 PDGFDQ9GZP0 370 aaPredicted RBP17.38■□□□□ 0.37
RAB40A-201ENST00000304236 SALL3Q9BXA9 1300 aa17.38■□□□□ 0.37
RAB40A-201ENST00000304236 ZBTB7AO95365 584 aa17.37■□□□□ 0.37
RAB40A-201ENST00000304236 CLEC17AQ6ZS10 378 aa17.37■□□□□ 0.37
RAB40A-201ENST00000304236 IBTKQ9P2D0 1353 aaPredicted RBP17.37■□□□□ 0.37
RAB40A-201ENST00000304236 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
RAB40A-201ENST00000304236 AOX1Q06278 1338 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
RAB40A-201ENST00000304236 NUCB2P80303 420 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
RAB40A-201ENST00000304236 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
RAB40A-201ENST00000304236 MX1P20591 662 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
RAB40A-201ENST00000304236 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
RAB40A-201ENST00000304236 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
RAB40A-201ENST00000304236 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
RAB40A-201ENST00000304236 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
RAB40A-201ENST00000304236 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
RAB40A-201ENST00000304236 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
RAB40A-201ENST00000304236 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
RAB40A-201ENST00000304236 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
RAB40A-201ENST00000304236 BTAF1O14981 1849 aa17.34■□□□□ 0.37
RAB40A-201ENST00000304236 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.37
RAB40A-201ENST00000304236 SSH3Q8TE77 659 aa17.33■□□□□ 0.37
RAB40A-201ENST00000304236 MTFR1LQ9H019 292 aa17.33■□□□□ 0.37
RAB40A-201ENST00000304236 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.37
RAB40A-201ENST00000304236 MEGF6O75095 1541 aa17.33■□□□□ 0.36
RAB40A-201ENST00000304236 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
RAB40A-201ENST00000304236 MRE11P49959 708 aa17.33■□□□□ 0.36
RAB40A-201ENST00000304236 FAM43AQ8N2R8 423 aa17.33■□□□□ 0.36
RAB40A-201ENST00000304236 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
RAB40A-201ENST00000304236 EPB41L2O43491 1005 aaKnown RBP17.32■□□□□ 0.36
RAB40A-201ENST00000304236 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
RAB40A-201ENST00000304236 MCCP23508 829 aa17.32■□□□□ 0.36
RAB40A-201ENST00000304236 PTGER2P43116 358 aa17.32■□□□□ 0.36
RAB40A-201ENST00000304236 TEFQ10587 303 aa17.32■□□□□ 0.36
RAB40A-201ENST00000304236 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
RAB40A-201ENST00000304236 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
RAB40A-201ENST00000304236 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
RAB40A-201ENST00000304236 MCM2P49736 904 aa17.31■□□□□ 0.36
RAB40A-201ENST00000304236 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
RAB40A-201ENST00000304236 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
RAB40A-201ENST00000304236 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
RAB40A-201ENST00000304236 SSFA2P28290 1259 aa17.3■□□□□ 0.36
RAB40A-201ENST00000304236 ANAPC15P60006 121 aa17.3■□□□□ 0.36
RAB40A-201ENST00000304236 POLA2Q14181 598 aa17.3■□□□□ 0.36
RAB40A-201ENST00000304236 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
RAB40A-201ENST00000304236 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
RAB40A-201ENST00000304236 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
RAB40A-201ENST00000304236 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
RAB40A-201ENST00000304236 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
RAB40A-201ENST00000304236 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
RAB40A-201ENST00000304236 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
RAB40A-201ENST00000304236 BAG4O95429 457 aaKnown RBP17.28■□□□□ 0.36
RAB40A-201ENST00000304236 CHMLP26374 656 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 TRIM6-TRIM34B2RNG4 842 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
RAB40A-201ENST00000304236 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 IL17RAQ96F46 866 aa17.28■□□□□ 0.36
RAB40A-201ENST00000304236 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
RAB40A-201ENST00000304236 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
RAB40A-201ENST00000304236 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
RAB40A-201ENST00000304236 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
RAB40A-201ENST00000304236 YY1P25490 414 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
RAB40A-201ENST00000304236 DOT1LQ8TEK3 1739 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 SHANK3Q9BYB0 1731 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 KCNQ4P56696 695 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
RAB40A-201ENST00000304236 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms