RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 IGKV5-2P06315 115 aa16.25■□□□□ 0.19
CCDC7-202ENST00000302316 GCC1Q96CN9 775 aa16.25■□□□□ 0.19
CCDC7-202ENST00000302316 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
CCDC7-202ENST00000302316 HMMRO75330 724 aa16.24■□□□□ 0.19
CCDC7-202ENST00000302316 NBPF7P0C2Y1 421 aaPredicted RBP16.24■□□□□ 0.19
CCDC7-202ENST00000302316 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
CCDC7-202ENST00000302316 BTAF1O14981 1849 aa16.24■□□□□ 0.19
CCDC7-202ENST00000302316 NEURL1BA8MQ27 555 aa16.24■□□□□ 0.19
CCDC7-202ENST00000302316 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
CCDC7-202ENST00000302316 PTF1AQ7RTS3 328 aa16.23■□□□□ 0.19
CCDC7-202ENST00000302316 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
CCDC7-202ENST00000302316 GRM8O00222 908 aa16.22■□□□□ 0.19
CCDC7-202ENST00000302316 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
CCDC7-202ENST00000302316 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
CCDC7-202ENST00000302316 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
CCDC7-202ENST00000302316 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
CCDC7-202ENST00000302316 ITPK1Q13572 414 aa16.22■□□□□ 0.19
CCDC7-202ENST00000302316 SBF2Q86WG5 1849 aa16.21■□□□□ 0.19
CCDC7-202ENST00000302316 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
CCDC7-202ENST00000302316 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.18
CCDC7-202ENST00000302316 NUCB1Q02818 461 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 GCKRQ14397 625 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.18
CCDC7-202ENST00000302316 ARXQ96QS3 562 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 DCTPP1Q9H773 170 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 BRWD3Q6RI45 1802 aa16.21■□□□□ 0.18
CCDC7-202ENST00000302316 UTYO14607 1347 aa16.2■□□□□ 0.18
CCDC7-202ENST00000302316 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
CCDC7-202ENST00000302316 ATP8B2P98198 1209 aa16.2■□□□□ 0.18
CCDC7-202ENST00000302316 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
CCDC7-202ENST00000302316 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
CCDC7-202ENST00000302316 RREB1Q92766 1687 aa16.2■□□□□ 0.18
CCDC7-202ENST00000302316 COL5A3P25940 1745 aaPredicted RBP16.2■□□□□ 0.18
CCDC7-202ENST00000302316 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
CCDC7-202ENST00000302316 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
CCDC7-202ENST00000302316 INTS5Q6P9B9 1019 aaKnown RBP16.19■□□□□ 0.18
CCDC7-202ENST00000302316 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
CCDC7-202ENST00000302316 MAP3K15Q6ZN16 1313 aa16.18■□□□□ 0.18
CCDC7-202ENST00000302316 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
CCDC7-202ENST00000302316 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
CCDC7-202ENST00000302316 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
CCDC7-202ENST00000302316 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
CCDC7-202ENST00000302316 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
CCDC7-202ENST00000302316 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
CCDC7-202ENST00000302316 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
CCDC7-202ENST00000302316 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
CCDC7-202ENST00000302316 A0A087WZG4 1122 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 PDE4AP27815 886 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
CCDC7-202ENST00000302316 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
CCDC7-202ENST00000302316 KCNQ4P56696 695 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
CCDC7-202ENST00000302316 LY75O60449 1722 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
CCDC7-202ENST00000302316 APBB1O00213 710 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 RXRBP28702 533 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 MTX1Q13505 466 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 POLA2Q14181 598 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 GIGYF2Q6Y7W6 1299 aaKnown RBP16.15■□□□□ 0.18
CCDC7-202ENST00000302316 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 BICC1Q9H694 974 aaKnown RBP16.15■□□□□ 0.18
CCDC7-202ENST00000302316 EXOC6BQ9Y2D4 811 aa16.15■□□□□ 0.18
CCDC7-202ENST00000302316 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
CCDC7-202ENST00000302316 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
CCDC7-202ENST00000302316 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
CCDC7-202ENST00000302316 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
CCDC7-202ENST00000302316 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
CCDC7-202ENST00000302316 HLFQ16534 295 aa16.13■□□□□ 0.17
CCDC7-202ENST00000302316 COL15A1P39059 1388 aa16.13■□□□□ 0.17
CCDC7-202ENST00000302316 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
CCDC7-202ENST00000302316 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
CCDC7-202ENST00000302316 CASP7P55210 303 aa16.12■□□□□ 0.17
CCDC7-202ENST00000302316 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
CCDC7-202ENST00000302316 EP400Q96L91 3159 aa16.12■□□□□ 0.17
CCDC7-202ENST00000302316 H7C1W4 665 aa16.12■□□□□ 0.17
CCDC7-202ENST00000302316 TRIM37O94972 964 aa16.12■□□□□ 0.17
CCDC7-202ENST00000302316 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
CCDC7-202ENST00000302316 SMARCA5O60264 1052 aaPredicted RBP16.11■□□□□ 0.17
CCDC7-202ENST00000302316 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
CCDC7-202ENST00000302316 GPTP24298 496 aa16.11■□□□□ 0.17
CCDC7-202ENST00000302316 NUP98P52948 1817 aa16.1■□□□□ 0.17
CCDC7-202ENST00000302316 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
CCDC7-202ENST00000302316 EPHA10Q5JZY3 1008 aa16.1■□□□□ 0.17
CCDC7-202ENST00000302316 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
CCDC7-202ENST00000302316 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
CCDC7-202ENST00000302316 RGS17Q9UGC6 210 aaPredicted RBP16.1■□□□□ 0.17
CCDC7-202ENST00000302316 TAF1LQ8IZX4 1826 aa16.09■□□□□ 0.17
CCDC7-202ENST00000302316 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
CCDC7-202ENST00000302316 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
CCDC7-202ENST00000302316 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
CCDC7-202ENST00000302316 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
CCDC7-202ENST00000302316 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms