RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
PGAP3-201ENST00000300658 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
PGAP3-201ENST00000300658 REC8O95072 547 aa20.24■□□□□ 0.83
PGAP3-201ENST00000300658 RABEP1Q15276 862 aa20.24■□□□□ 0.83
PGAP3-201ENST00000300658 MRC1P22897 1456 aa20.24■□□□□ 0.83
PGAP3-201ENST00000300658 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
PGAP3-201ENST00000300658 TTC5Q8N0Z6 440 aa20.24■□□□□ 0.83
PGAP3-201ENST00000300658 BICC1Q9H694 974 aaKnown RBP20.24■□□□□ 0.83
PGAP3-201ENST00000300658 UTYO14607 1347 aa20.23■□□□□ 0.83
PGAP3-201ENST00000300658 MCM4P33991 863 aa20.23■□□□□ 0.83
PGAP3-201ENST00000300658 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
PGAP3-201ENST00000300658 JARID2Q92833 1246 aaPredicted RBP20.23■□□□□ 0.83
PGAP3-201ENST00000300658 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
PGAP3-201ENST00000300658 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
PGAP3-201ENST00000300658 COL5A2P05997 1499 aaPredicted RBP20.22■□□□□ 0.83
PGAP3-201ENST00000300658 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
PGAP3-201ENST00000300658 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
PGAP3-201ENST00000300658 MYD88Q99836 296 aa20.22■□□□□ 0.83
PGAP3-201ENST00000300658 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
PGAP3-201ENST00000300658 AOX1Q06278 1338 aa20.21■□□□□ 0.83
PGAP3-201ENST00000300658 EPHA10Q5JZY3 1008 aa20.21■□□□□ 0.83
PGAP3-201ENST00000300658 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
PGAP3-201ENST00000300658 METTL22Q9BUU2 404 aaPredicted RBP20.2■□□□□ 0.82
PGAP3-201ENST00000300658 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
PGAP3-201ENST00000300658 OS9Q13438 667 aaPredicted RBP20.2■□□□□ 0.82
PGAP3-201ENST00000300658 GCKRQ14397 625 aa20.19■□□□□ 0.82
PGAP3-201ENST00000300658 KLHDC4Q8TBB5 520 aa20.19■□□□□ 0.82
PGAP3-201ENST00000300658 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
PGAP3-201ENST00000300658 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
PGAP3-201ENST00000300658 PLEKHG2Q9H7P9 1386 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 SASH1O94885 1247 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 HSP90AB4PQ58FF6 505 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 GLI3P10071 1580 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
PGAP3-201ENST00000300658 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 CARD10Q9BWT7 1032 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 ANO2Q9NQ90 1003 aa20.18■□□□□ 0.82
PGAP3-201ENST00000300658 ATP5J2-PTCD1G3V325 749 aa20.17■□□□□ 0.82
PGAP3-201ENST00000300658 PTCD1O75127 700 aaKnown RBP20.17■□□□□ 0.82
PGAP3-201ENST00000300658 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
PGAP3-201ENST00000300658 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
PGAP3-201ENST00000300658 IL2RBP14784 551 aa20.16■□□□□ 0.82
PGAP3-201ENST00000300658 RAB3GAP1Q15042 981 aa20.16■□□□□ 0.82
PGAP3-201ENST00000300658 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
PGAP3-201ENST00000300658 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
PGAP3-201ENST00000300658 CIZ1Q9ULV3 898 aaPredicted RBP20.16■□□□□ 0.82
PGAP3-201ENST00000300658 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
PGAP3-201ENST00000300658 SIL1Q9H173 461 aa20.15■□□□□ 0.82
PGAP3-201ENST00000300658 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.82
PGAP3-201ENST00000300658 A1BGP04217 495 aa20.14■□□□□ 0.81
PGAP3-201ENST00000300658 CLCN1P35523 988 aa20.14■□□□□ 0.81
PGAP3-201ENST00000300658 EVA1CP58658 441 aa20.14■□□□□ 0.81
PGAP3-201ENST00000300658 EAF2Q96CJ1 260 aaPredicted RBP20.14■□□□□ 0.81
PGAP3-201ENST00000300658 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
PGAP3-201ENST00000300658 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
PGAP3-201ENST00000300658 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
PGAP3-201ENST00000300658 SSFA2P28290 1259 aa20.12■□□□□ 0.81
PGAP3-201ENST00000300658 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
PGAP3-201ENST00000300658 AACSQ86V21 672 aa20.12■□□□□ 0.81
PGAP3-201ENST00000300658 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
PGAP3-201ENST00000300658 NEK4P51957 841 aa20.12■□□□□ 0.81
PGAP3-201ENST00000300658 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
PGAP3-201ENST00000300658 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
PGAP3-201ENST00000300658 UBE3BQ7Z3V4 1068 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 PARP4Q9UKK3 1724 aaKnown RBP20.11■□□□□ 0.81
PGAP3-201ENST00000300658 SGSM2O43147 1006 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 ST18O60284 1047 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 G3BP1Q13283 466 aaKnown RBP eCLIP20.11■□□□□ 0.81
PGAP3-201ENST00000300658 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 GLRX3O76003 335 aaKnown RBP20.11■□□□□ 0.81
PGAP3-201ENST00000300658 L1TD1Q5T7N2 865 aaKnown RBP20.11■□□□□ 0.81
PGAP3-201ENST00000300658 CNTROBQ8N137 903 aa20.11■□□□□ 0.81
PGAP3-201ENST00000300658 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
PGAP3-201ENST00000300658 PKP1Q13835 747 aa20.1■□□□□ 0.81
PGAP3-201ENST00000300658 ERC1Q8IUD2 1116 aa20.1■□□□□ 0.81
PGAP3-201ENST00000300658 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
PGAP3-201ENST00000300658 CASP7P55210 303 aa20.1■□□□□ 0.81
PGAP3-201ENST00000300658 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
PGAP3-201ENST00000300658 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
PGAP3-201ENST00000300658 TRAK2O60296 914 aa20.09■□□□□ 0.81
PGAP3-201ENST00000300658 XRCC6P12956 609 aaKnown RBP eCLIP20.09■□□□□ 0.81
PGAP3-201ENST00000300658 RFX5P48382 616 aaPredicted RBP20.09■□□□□ 0.81
PGAP3-201ENST00000300658 SHANK3Q9BYB0 1731 aa20.09■□□□□ 0.81
PGAP3-201ENST00000300658 A0A087WZG4 1122 aa20.09■□□□□ 0.81
PGAP3-201ENST00000300658 GZF1Q9H116 711 aaPredicted RBP20.09■□□□□ 0.81
PGAP3-201ENST00000300658 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
PGAP3-201ENST00000300658 BTG4Q9NY30 223 aa20.08■□□□□ 0.81
PGAP3-201ENST00000300658 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.8
PGAP3-201ENST00000300658 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.8
PGAP3-201ENST00000300658 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
PGAP3-201ENST00000300658 HSPA4P34932 840 aa20.07■□□□□ 0.8
PGAP3-201ENST00000300658 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
PGAP3-201ENST00000300658 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
PGAP3-201ENST00000300658 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
PGAP3-201ENST00000300658 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
PGAP3-201ENST00000300658 ANAPC15P60006 121 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms