RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
CCNDBP1-201ENST00000300213 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
CCNDBP1-201ENST00000300213 NCKAP5LQ9HCH0 1330 aa17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 SIL1Q9H173 461 aa17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 ARHGEF5Q12774 1597 aa17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 CCDC73Q6ZRK6 1079 aa17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 AOPEPQ8N6M6 819 aa17.31■□□□□ 0.36
CCNDBP1-201ENST00000300213 KINO60870 393 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 PTH1RQ03431 593 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 RAD51AP2Q09MP3 1159 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 LRRN4CLQ8ND94 238 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 LRRC2Q9BYS8 371 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 CEP152O94986 1710 aa17.3■□□□□ 0.36
CCNDBP1-201ENST00000300213 ME1P48163 572 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 SCAND2PQ9GZW5 306 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 HSP90AA4PQ58FG1 418 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 TRIM66O15016 1216 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 CLCN6P51797 869 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 GPATCH11Q8N954 259 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 TMEM87AQ8NBN3 555 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 RUFY2Q8WXA3 655 aa17.29■□□□□ 0.36
CCNDBP1-201ENST00000300213 ANKRD65E5RJM6 399 aa17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 TPM4P67936 248 aa17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 C11orf57Q6ZUT1 292 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 SGSM2O43147 1006 aa17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 PDCP20941 246 aa17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-201ENST00000300213 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 FLIIQ13045 1269 aa17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 BLOC1S2Q6QNY1 142 aa17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 HYPKQ9NX55 129 aa17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 ZNF853P0CG23 659 aa17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-201ENST00000300213 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■□□□□ 10.2
CCNDBP1-201ENST00000300213 SHPRHQ149N8 1683 aa17.27■□□□□ 0.35
CCNDBP1-201ENST00000300213 PDILTQ8N807 584 aa17.27■□□□□ 0.35
CCNDBP1-201ENST00000300213 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.35
CCNDBP1-201ENST00000300213 ST5P78524 1137 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 MED14O60244 1454 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 JAK2O60674 1132 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 IL13P35225 146 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 RASSF4Q9H2L5 321 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 CARD6Q9BX69 1037 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 PTPRCP08575 1304 aa17.26■□□□□ 0.35
CCNDBP1-201ENST00000300213 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 ANXA1P04083 346 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 PNMA6AP0CW24 399 aaPredicted RBP17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 CLSTN2Q9H4D0 955 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
CCNDBP1-201ENST00000300213 FEZ2Q9UHY8 353 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 PHACTR2O75167 634 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 OAS2P29728 719 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 GTF2A1P52655 376 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 MCM6Q14566 821 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 CEP57L1Q8IYX8 460 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 GOLGA8FQ08AF8 430 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 GOLGA8DPQ0D2H9 430 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 IFNKQ9P0W0 207 aa17.24■□□□□ 0.35
CCNDBP1-201ENST00000300213 ARHGAP31Q2M1Z3 1444 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 ZSCAN26Q16670 478 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 BRF1Q92994 677 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 SYCP1Q15431 976 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 SMARCE1Q969G3 411 aa17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 CCDC8Q9H0W5 538 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-201ENST00000300213 ABCA8O94911 1581 aa17.22■□□□□ 0.35
CCNDBP1-201ENST00000300213 LSG1Q9H089 658 aaKnown RBP17.22■□□□□ 0.35
CCNDBP1-201ENST00000300213 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
CCNDBP1-201ENST00000300213 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms