RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF830Q96NB3 372 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 C6orf229H3BNL8 230 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 ZSCAN12O43309 604 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TBC1D9Q6ZT07 1266 aa15.71■□□□□ 0.11
CHRFAM7A-201ENST00000299847 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TMEM67Q5HYA8 995 aa15.71■□□□□ 0.1
CHRFAM7A-201ENST00000299847 IQCA1Q86XH1 822 aa15.71■□□□□ 0.1
CHRFAM7A-201ENST00000299847 NECAB1Q8N987 351 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 PUF60Q9UHX1 559 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TMEM266Q2M3C6 531 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CATIPQ7Z7H3 387 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 IDEP14735 1019 aa15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
CHRFAM7A-201ENST00000299847 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ADCY5O95622 1261 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CEBPAP49715 358 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 FBXO31Q5XUX0 539 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SHTN1A0MZ66 631 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 IGHDP01880 384 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CCDC91Q7Z6B0 441 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 NAIPQ13075 1403 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SAMM50Q9Y512 469 aa15.69■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TCEANC2Q96MN5 208 aa15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SERPINA10Q9UK55 444 aa15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 FLIIQ13045 1269 aa15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 HLTFQ14527 1009 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SH2B1Q9NRF2 756 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-201ENST00000299847 MYO1BO43795 1136 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CTNNA2P26232 953 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 NOP2P46087 812 aaKnown RBP15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 YEATS4O95619 227 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ADGRF5Q8IZF2 1346 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TSPY2A6NKD2 308 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 PRC1O43663 620 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 STX6O43752 255 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CETN2P41208 172 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 AFMP43652 599 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 MBIPQ9NS73 344 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 FERMT2Q96AC1 680 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
CHRFAM7A-201ENST00000299847 TRIM21P19474 475 aaKnown RBP15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 RPGRIP1LQ68CZ1 1315 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 SYCP3Q8IZU3 236 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 FEZ1Q99689 392 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 KAT14Q9H8E8 782 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 LDHAL6AQ6ZMR3 332 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 CCDC150Q8NCX0 1101 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 VPS36Q86VN1 386 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 ATP2C2O75185 946 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 HMGB1P09429 215 aaKnown RBP15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 AMOTL2Q9Y2J4 779 aa15.65■□□□□ 0.1
CHRFAM7A-201ENST00000299847 MAATS1Q7Z4T9 603 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 USO1O60763 962 aaKnown RBP15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 STX1AQ16623 288 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 IARSP41252 1262 aaKnown RBP15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CALML4Q96GE6 196 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 JADE2Q9NQC1 790 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PI4KAP2A4QPH2 592 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PI4KAP1Q8N8J0 262 aa15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
CHRFAM7A-201ENST00000299847 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 MFSD6Q6ZSS7 791 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
CHRFAM7A-201ENST00000299847 NEK1Q96PY6 1258 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms