RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 NBPF7P0C2Y1 421 aaPredicted RBP23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 C9orf78Q9NZ63 289 aaPredicted RBP23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
SEC61A2-201ENST00000298428 GCC1Q96CN9 775 aa23.16■■□□□ 1.3
SEC61A2-201ENST00000298428 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
SEC61A2-201ENST00000298428 BTAF1O14981 1849 aa23.16■■□□□ 1.3
SEC61A2-201ENST00000298428 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
SEC61A2-201ENST00000298428 NEURL1BA8MQ27 555 aa23.15■■□□□ 1.3
SEC61A2-201ENST00000298428 IBTKQ9P2D0 1353 aaPredicted RBP23.15■■□□□ 1.3
SEC61A2-201ENST00000298428 ITPK1Q13572 414 aa23.15■■□□□ 1.3
SEC61A2-201ENST00000298428 SBF2Q86WG5 1849 aa23.14■■□□□ 1.29
SEC61A2-201ENST00000298428 HMMRO75330 724 aa23.14■■□□□ 1.29
SEC61A2-201ENST00000298428 RGS3P49796 1198 aa23.14■■□□□ 1.29
SEC61A2-201ENST00000298428 ZBTB3Q9H5J0 574 aa23.14■■□□□ 1.29
SEC61A2-201ENST00000298428 ZNF831Q5JPB2 1677 aa23.14■■□□□ 1.29
SEC61A2-201ENST00000298428 GRM8O00222 908 aa23.13■■□□□ 1.29
SEC61A2-201ENST00000298428 KRT27Q7Z3Y8 459 aa23.13■■□□□ 1.29
SEC61A2-201ENST00000298428 BRWD3Q6RI45 1802 aa23.13■■□□□ 1.29
SEC61A2-201ENST00000298428 KIF6Q6ZMV9 814 aa23.13■■□□□ 1.29
SEC61A2-201ENST00000298428 IL6STP40189 918 aaPredicted RBP23.12■■□□□ 1.29
SEC61A2-201ENST00000298428 GCKRQ14397 625 aa23.12■■□□□ 1.29
SEC61A2-201ENST00000298428 CCDC87Q9NVE4 849 aa23.12■■□□□ 1.29
SEC61A2-201ENST00000298428 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 DCTPP1Q9H773 170 aa23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 HDAC5Q9UQL6 1122 aa23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 UTYO14607 1347 aa23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 AFDNP55196 1824 aaKnown RBP23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 ATP5J2-PTCD1G3V325 749 aa23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 INTS5Q6P9B9 1019 aaKnown RBP23.11■■□□□ 1.29
SEC61A2-201ENST00000298428 NUCB1Q02818 461 aa23.1■■□□□ 1.29
SEC61A2-201ENST00000298428 FAM196AQ6ZSG2 479 aa23.1■■□□□ 1.29
SEC61A2-201ENST00000298428 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
SEC61A2-201ENST00000298428 RREB1Q92766 1687 aa23.1■■□□□ 1.29
SEC61A2-201ENST00000298428 COL5A3P25940 1745 aaPredicted RBP23.09■■□□□ 1.29
SEC61A2-201ENST00000298428 ARXQ96QS3 562 aa23.09■■□□□ 1.29
SEC61A2-201ENST00000298428 PNMA6EA0A0J9YXQ4 647 aa23.09■■□□□ 1.29
SEC61A2-201ENST00000298428 MAP3K15Q6ZN16 1313 aa23.09■■□□□ 1.29
SEC61A2-201ENST00000298428 BCL11BQ9C0K0 894 aaPredicted RBP23.08■■□□□ 1.29
SEC61A2-201ENST00000298428 ANKRD45Q5TZF3 282 aa23.07■■□□□ 1.28
SEC61A2-201ENST00000298428 RXRBP28702 533 aa23.07■■□□□ 1.28
SEC61A2-201ENST00000298428 EIF5P55010 431 aaKnown RBP23.07■■□□□ 1.28
SEC61A2-201ENST00000298428 CHD1LQ86WJ1 897 aa23.07■■□□□ 1.28
SEC61A2-201ENST00000298428 PPP1R42Q7Z4L9 355 aa23.06■■□□□ 1.28
SEC61A2-201ENST00000298428 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
SEC61A2-201ENST00000298428 SUCLG2Q96I99 432 aa23.06■■□□□ 1.28
SEC61A2-201ENST00000298428 TCIRG1Q13488 830 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 DZIP3Q86Y13 1208 aaKnown RBP23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 LNPKQ9C0E8 428 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 A0A087WZG4 1122 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 KCNQ4P56696 695 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 CCDC191Q8NCU4 936 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 SSH3Q8TE77 659 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 TSHZ2Q9NRE2 1034 aa23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 CCNL1Q9UK58 526 aaPredicted RBP23.05■■□□□ 1.28
SEC61A2-201ENST00000298428 LY75O60449 1722 aa23.04■■□□□ 1.28
SEC61A2-201ENST00000298428 SRGAP3O43295 1099 aa23.04■■□□□ 1.28
SEC61A2-201ENST00000298428 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
SEC61A2-201ENST00000298428 PDE4AP27815 886 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 MTX1Q13505 466 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 UBE3BQ7Z3V4 1068 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 ISCA1Q9BUE6 129 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 TBC1D2BQ9UPU7 963 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 CNTNAP4Q9C0A0 1308 aa23.03■■□□□ 1.28
SEC61A2-201ENST00000298428 ERVV-1B6SEH8 477 aa23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 POLA2Q14181 598 aa23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 KAZALD1Q96I82 304 aa23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 HLFQ16534 295 aa23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 HSP90AB3PQ58FF7 597 aa23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 BICC1Q9H694 974 aaKnown RBP23.02■■□□□ 1.28
SEC61A2-201ENST00000298428 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
SEC61A2-201ENST00000298428 EP400Q96L91 3159 aa23.01■■□□□ 1.27
SEC61A2-201ENST00000298428 TRIM28Q13263 835 aaKnown RBP23■■□□□ 1.27
SEC61A2-201ENST00000298428 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
SEC61A2-201ENST00000298428 EXOC6BQ9Y2D4 811 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 COL15A1P39059 1388 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 H7C1W4 665 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 APBB1O00213 710 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 TRIM37O94972 964 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 CASP7P55210 303 aa23■■□□□ 1.27
SEC61A2-201ENST00000298428 RC3H1Q5TC82 1133 aaKnown RBP22.98■■□□□ 1.27
SEC61A2-201ENST00000298428 ANKRD36CQ5JPF3 1778 aa22.98■■□□□ 1.27
SEC61A2-201ENST00000298428 NUP98P52948 1817 aa22.97■■□□□ 1.27
SEC61A2-201ENST00000298428 EPHA10Q5JZY3 1008 aa22.97■■□□□ 1.27
SEC61A2-201ENST00000298428 POTEAQ6S8J7 498 aa22.97■■□□□ 1.27
SEC61A2-201ENST00000298428 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
SEC61A2-201ENST00000298428 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
SEC61A2-201ENST00000298428 CAMTA2O94983 1202 aa22.96■■□□□ 1.27
SEC61A2-201ENST00000298428 GPTP24298 496 aa22.96■■□□□ 1.27
SEC61A2-201ENST00000298428 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
SEC61A2-201ENST00000298428 SMARCA5O60264 1052 aaPredicted RBP22.95■■□□□ 1.26
SEC61A2-201ENST00000298428 NLRP10Q86W26 655 aa22.95■■□□□ 1.26
SEC61A2-201ENST00000298428 RABL6Q3YEC7 729 aaPredicted RBP22.94■■□□□ 1.26
SEC61A2-201ENST00000298428 LRRCC1Q9C099 1032 aa22.94■■□□□ 1.26
SEC61A2-201ENST00000298428 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
SEC61A2-201ENST00000298428 GNPATO15228 680 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms