RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 PI4KAP1Q8N8J0 262 aa18.53■□□□□ 0.56
LRRTM1-201ENST00000295057 TSC1Q92574 1164 aa18.53■□□□□ 0.56
LRRTM1-201ENST00000295057 UTP14CQ5TAP6 766 aaKnown RBP18.52■□□□□ 0.56
LRRTM1-201ENST00000295057 RPAP2Q8IXW5 612 aaPredicted RBP18.52■□□□□ 0.56
LRRTM1-201ENST00000295057 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
LRRTM1-201ENST00000295057 SLC52A2Q9HAB3 445 aa18.52■□□□□ 0.56
LRRTM1-201ENST00000295057 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.56
LRRTM1-201ENST00000295057 ST18O60284 1047 aa18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 SDSP20132 328 aa18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 DMTNQ08495 405 aa18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
LRRTM1-201ENST00000295057 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
LRRTM1-201ENST00000295057 GNAI2P04899 355 aa18.5■□□□□ 0.55
LRRTM1-201ENST00000295057 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
LRRTM1-201ENST00000295057 PTMAP06454 111 aaKnown RBP18.5■□□□□ 0.55
LRRTM1-201ENST00000295057 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
LRRTM1-201ENST00000295057 HOXB7P09629 217 aa18.49■□□□□ 0.55
LRRTM1-201ENST00000295057 AIMP1Q12904 312 aaKnown RBP18.49■□□□□ 0.55
LRRTM1-201ENST00000295057 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
LRRTM1-201ENST00000295057 ZNF830Q96NB3 372 aaPredicted RBP18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 EVA1CP58658 441 aa18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 DDX54Q8TDD1 881 aaKnown RBP18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 ADCY9O60503 1353 aa18.48■□□□□ 0.55
LRRTM1-201ENST00000295057 NBPF7P0C2Y1 421 aaPredicted RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 COL5A2P05997 1499 aaPredicted RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 MYL6BP14649 208 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 DNAAF4Q8WXU2 420 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 CCDC94Q9BW85 323 aaPredicted RBP18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
LRRTM1-201ENST00000295057 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
LRRTM1-201ENST00000295057 MAP3K2Q9Y2U5 619 aa18.46■□□□□ 0.55
LRRTM1-201ENST00000295057 FAM177BA6PVY3 158 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 GNAI3P08754 354 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 PDIA6Q15084 440 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 C17orf53Q8N3J3 647 aaPredicted RBP18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 CABP4P57796 275 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 PDE4CQ08493 712 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 ZNF710Q8N1W2 664 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 TSPY26PQ9H489 355 aa18.45■□□□□ 0.54
LRRTM1-201ENST00000295057 SIPA1L3O60292 1781 aaPredicted RBP18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 MBD3O95983 291 aa18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 ZSCAN20P17040 1043 aaPredicted RBP18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 GDPD2Q9HCC8 539 aa18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
LRRTM1-201ENST00000295057 NEK4P51957 841 aa18.43■□□□□ 0.54
LRRTM1-201ENST00000295057 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
LRRTM1-201ENST00000295057 ADAMTS7Q9UKP4 1686 aa18.43■□□□□ 0.54
LRRTM1-201ENST00000295057 HMMRO75330 724 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 GADD45BO75293 160 aaPredicted RBP18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 IL2RBP14784 551 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 CARD10Q9BWT7 1032 aa18.42■□□□□ 0.54
LRRTM1-201ENST00000295057 BRD1O95696 1058 aa18.41■□□□□ 0.54
LRRTM1-201ENST00000295057 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
LRRTM1-201ENST00000295057 REC8O95072 547 aa18.41■□□□□ 0.54
LRRTM1-201ENST00000295057 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
LRRTM1-201ENST00000295057 ABCC6O95255 1503 aa18.41■□□□□ 0.54
LRRTM1-201ENST00000295057 CBX1P83916 185 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 ERC2O15083 957 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 CACNA1FO60840 1977 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 ABCA3Q99758 1704 aa18.4■□□□□ 0.54
LRRTM1-201ENST00000295057 TPRNQ4KMQ1 711 aa18.39■□□□□ 0.54
LRRTM1-201ENST00000295057 USP25Q9UHP3 1055 aa18.39■□□□□ 0.54
LRRTM1-201ENST00000295057 XAGE3Q8WTP9 111 aa18.39■□□□□ 0.53
LRRTM1-201ENST00000295057 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
LRRTM1-201ENST00000295057 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.53
LRRTM1-201ENST00000295057 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
LRRTM1-201ENST00000295057 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
LRRTM1-201ENST00000295057 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
LRRTM1-201ENST00000295057 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
LRRTM1-201ENST00000295057 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
LRRTM1-201ENST00000295057 C5P01031 1676 aa18.38■□□□□ 0.53
LRRTM1-201ENST00000295057 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms