RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 HSPA4P34932 840 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 FAM98CQ17RN3 349 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 C16orf71Q8IYS4 520 aaPredicted RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 RRS1Q15050 365 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 SNRKQ9NRH2 765 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 MAP3K19Q56UN5 1328 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 MRC1P22897 1456 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 EZH2Q15910 746 aaKnown RBP7.47□□□□□ -1.21
VCAM1-201ENST00000294728 CCDC9Q9Y3X0 531 aaKnown RBP7.47□□□□□ -1.21
VCAM1-201ENST00000294728 NUTM2FA1L443 756 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 DYNC1I1O14576 645 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 YY1P25490 414 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 MTX1Q13505 466 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 CAVIN1Q6NZI2 390 aaKnown RBP7.47□□□□□ -1.21
VCAM1-201ENST00000294728 TICAM2Q86XR7 235 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 TM6SF1Q9BZW5 370 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 BTG4Q9NY30 223 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 SPATA31A1Q5TZJ5 1347 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 TTC41PQ6P2S7 1318 aa7.47□□□□□ -1.21
VCAM1-201ENST00000294728 NFAT5O94916 1531 aa7.46□□□□□ -1.21
VCAM1-201ENST00000294728 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.21
VCAM1-201ENST00000294728 HSP90AB4PQ58FF6 505 aa7.46□□□□□ -1.21
VCAM1-201ENST00000294728 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.21
VCAM1-201ENST00000294728 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.21
VCAM1-201ENST00000294728 OTUD7AQ8TE49 926 aaPredicted RBP7.46□□□□□ -1.21
VCAM1-201ENST00000294728 RTF1Q92541 710 aaKnown RBP7.46□□□□□ -1.21
VCAM1-201ENST00000294728 ALDH8A1Q9H2A2 487 aaPredicted RBP7.46□□□□□ -1.21
VCAM1-201ENST00000294728 CCDC171Q6TFL3 1326 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 RAD50Q92878 1312 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 TMEM63CQ9P1W3 806 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.22
VCAM1-201ENST00000294728 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
VCAM1-201ENST00000294728 FBLN1P23142 703 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 FLIIQ13045 1269 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 MTHFSDQ2M296 383 aaKnown RBP7.46□□□□□ -1.22
VCAM1-201ENST00000294728 ZGPATQ8N5A5 531 aaKnown RBP7.46□□□□□ -1.22
VCAM1-201ENST00000294728 TTC14Q96N46 770 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 HDAC5Q9UQL6 1122 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 ATP6V1DQ9Y5K8 247 aa7.46□□□□□ -1.22
VCAM1-201ENST00000294728 TPM3P06753 285 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCAM1-201ENST00000294728 DCTN1Q14203 1278 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 BARGINQ6ZT62 677 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 KIAA1211Q6ZU35 1233 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 TCHHQ07283 1943 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 GNAT3A8MTJ3 354 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 NEK4P51957 841 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 PKP1Q13835 747 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 MCM10Q7L590 875 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 TSPY26PQ9H489 355 aa7.45□□□□□ -1.22
VCAM1-201ENST00000294728 WNK3Q9BYP7 1800 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 SGSM2O43147 1006 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 HSP90AB2PQ58FF8 381 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 PRIMPOLQ96LW4 560 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 SBF2Q86WG5 1849 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 TAF7Q15545 349 aaPredicted RBP7.44□□□□□ -1.22
VCAM1-201ENST00000294728 PI4K2BQ8TCG2 481 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 ZSCAN31Q96LW9 406 aaPredicted RBP7.44□□□□□ -1.22
VCAM1-201ENST00000294728 USP25Q9UHP3 1055 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.44□□□□□ -1.22
VCAM1-201ENST00000294728 SLIT3O75094 1523 aa7.44□□□□□ -1.22
VCAM1-201ENST00000294728 SMARCA5O60264 1052 aaPredicted RBP7.43□□□□□ -1.22
VCAM1-201ENST00000294728 CCDC183Q5T5S1 534 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 SASS6Q6UVJ0 657 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 USP44Q9H0E7 712 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 SH2B1Q9NRF2 756 aaPredicted RBP7.43□□□□□ -1.22
VCAM1-201ENST00000294728 MYH15Q9Y2K3 1946 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 RFX7Q2KHR2 1363 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 UBE2HP62256 183 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 G2E3Q7L622 706 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 SPTLC3Q9NUV7 552 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 COL15A1P39059 1388 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 NCLP19338 710 aaKnown RBP7.43□□□□□ -1.22
VCAM1-201ENST00000294728 HMGN5P82970 282 aaKnown RBP7.43□□□□□ -1.22
VCAM1-201ENST00000294728 EYA1Q99502 592 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 LSG1Q9H089 658 aaKnown RBP7.43□□□□□ -1.22
VCAM1-201ENST00000294728 UTYO14607 1347 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 ELP1O95163 1332 aa7.43□□□□□ -1.22
VCAM1-201ENST00000294728 A0A0G2JS52 829 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 KCNQ2O43526 872 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 TRIM37O94972 964 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 KRT24Q2M2I5 525 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 FAM182BQ5T319 152 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 VPS53Q5VIR6 699 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 FOXD4L1Q9NU39 408 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 HIP1O00291 1037 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 APBA3O96018 575 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 ZSCAN22P10073 491 aaPredicted RBP7.42□□□□□ -1.22
VCAM1-201ENST00000294728 NBPF14Q5TI25 921 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 CNTROBQ8N137 903 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 FUCA2Q9BTY2 467 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 CPDO75976 1380 aa7.42□□□□□ -1.22
VCAM1-201ENST00000294728 BCL9O00512 1426 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms