RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 SYT1P21579 422 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 HSP90AB4PQ58FF6 505 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
CHRNE-201ENST00000293780 RGPD2P0DJD1 1756 aa20.28■□□□□ 0.84
CHRNE-201ENST00000293780 GLRX3O76003 335 aaKnown RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 ZSCAN22P10073 491 aaPredicted RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 CWF19L2Q2TBE0 894 aaKnown RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 ADCK5Q3MIX3 580 aa20.28■□□□□ 0.84
CHRNE-201ENST00000293780 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
CHRNE-201ENST00000293780 DDX54Q8TDD1 881 aaKnown RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 DIAPH3Q9NSV4 1193 aa20.28■□□□□ 0.84
CHRNE-201ENST00000293780 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 USP42Q9H9J4 1324 aaKnown RBP20.28■□□□□ 0.84
CHRNE-201ENST00000293780 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
CHRNE-201ENST00000293780 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
CHRNE-201ENST00000293780 STX6O43752 255 aa20.27■□□□□ 0.84
CHRNE-201ENST00000293780 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
CHRNE-201ENST00000293780 PSME1Q06323 249 aa20.27■□□□□ 0.83
CHRNE-201ENST00000293780 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.83
CHRNE-201ENST00000293780 HYPKQ9NX55 129 aa20.27■□□□□ 0.83
CHRNE-201ENST00000293780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.27■□□□□ 0.83
CHRNE-201ENST00000293780 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
CHRNE-201ENST00000293780 CCDC39Q9UFE4 941 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 NFAT5O94916 1531 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 RNMTO43148 476 aaKnown RBP20.26■□□□□ 0.83
CHRNE-201ENST00000293780 ESCO1Q5FWF5 840 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 CCDC83Q8IWF9 413 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 TMEM87AQ8NBN3 555 aa20.26■□□□□ 0.83
CHRNE-201ENST00000293780 MTX1Q13505 466 aa20.25■□□□□ 0.83
CHRNE-201ENST00000293780 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
CHRNE-201ENST00000293780 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
CHRNE-201ENST00000293780 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
CHRNE-201ENST00000293780 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
CHRNE-201ENST00000293780 MPNDQ8N594 471 aa20.25■□□□□ 0.83
CHRNE-201ENST00000293780 GIGYF1O75420 1035 aaPredicted RBP20.24■□□□□ 0.83
CHRNE-201ENST00000293780 FIBPO43427 364 aa20.24■□□□□ 0.83
CHRNE-201ENST00000293780 F13A1P00488 732 aa20.24■□□□□ 0.83
CHRNE-201ENST00000293780 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
CHRNE-201ENST00000293780 KSR2Q6VAB6 950 aa20.24■□□□□ 0.83
CHRNE-201ENST00000293780 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
CHRNE-201ENST00000293780 PHF14O94880 888 aa20.23■□□□□ 0.83
CHRNE-201ENST00000293780 AACSQ86V21 672 aa20.23■□□□□ 0.83
CHRNE-201ENST00000293780 PXDNQ92626 1479 aa20.23■□□□□ 0.83
CHRNE-201ENST00000293780 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
CHRNE-201ENST00000293780 GJB2P29033 226 aa20.22■□□□□ 0.83
CHRNE-201ENST00000293780 COL9A3Q14050 684 aaPredicted RBP20.22■□□□□ 0.83
CHRNE-201ENST00000293780 RUFY2Q8WXA3 655 aa20.22■□□□□ 0.83
CHRNE-201ENST00000293780 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
CHRNE-201ENST00000293780 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
CHRNE-201ENST00000293780 ALDH1L1O75891 902 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 PTMAP06454 111 aaKnown RBP20.21■□□□□ 0.83
CHRNE-201ENST00000293780 ST3GAL1Q11201 340 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 AIMP1Q12904 312 aaKnown RBP20.21■□□□□ 0.83
CHRNE-201ENST00000293780 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
CHRNE-201ENST00000293780 ZSWIM6Q9HCJ5 1215 aa20.21■□□□□ 0.83
CHRNE-201ENST00000293780 SASH1O94885 1247 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 MCM5P33992 734 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 UBE2HP62256 183 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 DNM1Q05193 864 aaKnown RBP20.2■□□□□ 0.82
CHRNE-201ENST00000293780 NECTIN1Q15223 517 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 ME3Q16798 604 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 EAF2Q96CJ1 260 aaPredicted RBP20.2■□□□□ 0.82
CHRNE-201ENST00000293780 MTMR6Q9Y217 621 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 LMO7Q8WWI1 1683 aa20.2■□□□□ 0.82
CHRNE-201ENST00000293780 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
CHRNE-201ENST00000293780 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 BICC1Q9H694 974 aaKnown RBP20.19■□□□□ 0.82
CHRNE-201ENST00000293780 USP25Q9UHP3 1055 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 CYP46A1Q9Y6A2 500 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHRNE-201ENST00000293780 HSPA2P54652 639 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 KCNB2Q92953 911 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 GPATCH3Q96I76 525 aa20.19■□□□□ 0.82
CHRNE-201ENST00000293780 TLR7Q9NYK1 1049 aaKnown RBP20.19■□□□□ 0.82
CHRNE-201ENST00000293780 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
CHRNE-201ENST00000293780 GCP02774 474 aa20.18■□□□□ 0.82
CHRNE-201ENST00000293780 RBM10P98175 930 aaKnown RBP20.18■□□□□ 0.82
CHRNE-201ENST00000293780 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
CHRNE-201ENST00000293780 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
CHRNE-201ENST00000293780 CCDC171Q6TFL3 1326 aa20.18■□□□□ 0.82
CHRNE-201ENST00000293780 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
CHRNE-201ENST00000293780 ERC1Q8IUD2 1116 aa20.18■□□□□ 0.82
CHRNE-201ENST00000293780 GRM8O00222 908 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 CREB3L3Q68CJ9 461 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 SIL1Q9H173 461 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 TERF1P54274 439 aa20.17■□□□□ 0.82
CHRNE-201ENST00000293780 GIMAP6Q6P9H5 292 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms