RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 SLIT2O94813 1529 aa17.33■□□□□ 0.37
ABCF3-201ENST00000292808 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
ABCF3-201ENST00000292808 PDE1AP54750 535 aa17.33■□□□□ 0.36
ABCF3-201ENST00000292808 ASAP1Q9ULH1 1129 aa17.33■□□□□ 0.36
ABCF3-201ENST00000292808 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.36
ABCF3-201ENST00000292808 A1BGP04217 495 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 CDC45O75419 566 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
ABCF3-201ENST00000292808 GCKRQ14397 625 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 BCL9O00512 1426 aa17.32■□□□□ 0.36
ABCF3-201ENST00000292808 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-201ENST00000292808 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-201ENST00000292808 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
ABCF3-201ENST00000292808 SDSP20132 328 aa17.31■□□□□ 0.36
ABCF3-201ENST00000292808 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-201ENST00000292808 TJP1Q07157 1748 aa17.31■□□□□ 0.36
ABCF3-201ENST00000292808 RBM25P49756 843 aaKnown RBP17.31■□□□□ 0.36
ABCF3-201ENST00000292808 GSE1Q14687 1217 aa17.31■□□□□ 0.36
ABCF3-201ENST00000292808 TSHZ3Q63HK5 1081 aa17.31■□□□□ 0.36
ABCF3-201ENST00000292808 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
ABCF3-201ENST00000292808 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
ABCF3-201ENST00000292808 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
ABCF3-201ENST00000292808 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
ABCF3-201ENST00000292808 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
ABCF3-201ENST00000292808 RAB11FIP3O75154 756 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 EXOC5O00471 708 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 MX1P20591 662 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
ABCF3-201ENST00000292808 UBAP1LF5GYI3 381 aa17.28■□□□□ 0.36
ABCF3-201ENST00000292808 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
ABCF3-201ENST00000292808 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
ABCF3-201ENST00000292808 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
ABCF3-201ENST00000292808 PA2G4Q9UQ80 394 aaKnown RBP17.27■□□□□ 0.36
ABCF3-201ENST00000292808 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.35
ABCF3-201ENST00000292808 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.35
ABCF3-201ENST00000292808 CASP7P55210 303 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 KAT6BQ8WYB5 2073 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-201ENST00000292808 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
ABCF3-201ENST00000292808 COL15A1P39059 1388 aa17.25■□□□□ 0.35
ABCF3-201ENST00000292808 SNX21Q969T3 373 aa17.25■□□□□ 0.35
ABCF3-201ENST00000292808 KIF2CQ99661 725 aa17.24■□□□□ 0.35
ABCF3-201ENST00000292808 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-201ENST00000292808 AOX1Q06278 1338 aa17.24■□□□□ 0.35
ABCF3-201ENST00000292808 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
ABCF3-201ENST00000292808 DDB1Q16531 1140 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 HSP90AB4PQ58FF6 505 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-201ENST00000292808 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
ABCF3-201ENST00000292808 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
ABCF3-201ENST00000292808 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
ABCF3-201ENST00000292808 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-201ENST00000292808 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
ABCF3-201ENST00000292808 A0A087WZG4 1122 aa17.22■□□□□ 0.35
ABCF3-201ENST00000292808 JCADQ9P266 1359 aa17.22■□□□□ 0.35
ABCF3-201ENST00000292808 H7C1W4 665 aa17.21■□□□□ 0.35
ABCF3-201ENST00000292808 SASH1O94885 1247 aa17.21■□□□□ 0.35
ABCF3-201ENST00000292808 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-201ENST00000292808 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
ABCF3-201ENST00000292808 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-201ENST00000292808 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-201ENST00000292808 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
ABCF3-201ENST00000292808 CASC1Q6TDU7 716 aa17.21■□□□□ 0.34
ABCF3-201ENST00000292808 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
ABCF3-201ENST00000292808 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-201ENST00000292808 OS9Q13438 667 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-201ENST00000292808 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
ABCF3-201ENST00000292808 FOXO4P98177 505 aa17.19■□□□□ 0.34
ABCF3-201ENST00000292808 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
ABCF3-201ENST00000292808 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
ABCF3-201ENST00000292808 CWC25Q9NXE8 425 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-201ENST00000292808 STARD3NLO95772 234 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
ABCF3-201ENST00000292808 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-201ENST00000292808 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 SIL1Q9H173 461 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
ABCF3-201ENST00000292808 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
ABCF3-201ENST00000292808 CCDC191Q8NCU4 936 aa17.17■□□□□ 0.34
ABCF3-201ENST00000292808 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
ABCF3-201ENST00000292808 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
ABCF3-201ENST00000292808 CHMLP26374 656 aa17.16■□□□□ 0.34
ABCF3-201ENST00000292808 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
ABCF3-201ENST00000292808 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms