RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 KLHL40Q2TBA0 621 aa11.76□□□□□ -0.53
KPNB1-201ENST00000290158 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■■■■ 31.3
KPNB1-201ENST00000290158 SSFA2P28290 1259 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 SSR1P43307 286 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 GSDMDP57764 484 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 FEZ1Q99689 392 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 TRMT1Q9NXH9 659 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 RSPH14Q9UHP6 348 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 PDRG1Q9NUG6 133 aa11.75□□□□□ -0.53
KPNB1-201ENST00000290158 TMPOP42166 694 aaKnown RBP11.75□□□□□ -0.53
KPNB1-201ENST00000290158 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 FBLN1P23142 703 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC96Q2M329 555 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 HS1BP3Q53T59 392 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 KIF21AQ7Z4S6 1674 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 SNW1Q13573 536 aaKnown RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 TRIM22Q8IYM9 498 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 SLC5A1P13866 664 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 STIM1Q13586 685 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 NBPF6Q5VWK0 638 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 NBPF4Q96M43 638 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 SRRTQ9BXP5 876 aaKnown RBP11.74□□□□□ -0.53
KPNB1-201ENST00000290158 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
KPNB1-201ENST00000290158 TAF4BQ92750 862 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 MICALL1Q8N3F8 863 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 F6X3S4 739 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 F8W031 263 aaPredicted RBP11.73□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 PANK2Q9BZ23 570 aa11.73□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC175P0C221 793 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 POLD1P28340 1107 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 DDB1Q16531 1140 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
KPNB1-201ENST00000290158 GOLGA6L9A6NEM1 432 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 HSPA4P34932 840 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
KPNB1-201ENST00000290158 AKAP2Q9Y2D5 859 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 A0A1B0GUL7 405 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
KPNB1-201ENST00000290158 CCDC83Q8IWF9 413 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 LRSAM1Q6UWE0 723 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
KPNB1-201ENST00000290158 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
KPNB1-201ENST00000290158 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
KPNB1-201ENST00000290158 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
KPNB1-201ENST00000290158 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 MAP3K2Q9Y2U5 619 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 C10orf67Q8IYJ2 551 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 ZNF397Q8NF99 534 aaPredicted RBP11.71□□□□□ -0.53
KPNB1-201ENST00000290158 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.53
KPNB1-201ENST00000290158 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 GUCY1B3Q02153 619 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.53
KPNB1-201ENST00000290158 WDR7Q9Y4E6 1490 aa11.71□□□□□ -0.54
KPNB1-201ENST00000290158 RBM26Q5T8P6 1007 aaKnown RBP11.71□□□□□ -0.54
KPNB1-201ENST00000290158 GOPCQ9HD26 462 aa11.71□□□□□ -0.54
KPNB1-201ENST00000290158 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.54
KPNB1-201ENST00000290158 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 RIMS2Q9UQ26 1411 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 BOLA2Q9H3K6 86 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 A0A087WZG4 1122 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 BAG4O95429 457 aaKnown RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 SPECC1LQ69YQ0 1117 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 ARFGAP3Q9NP61 516 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 SARNPP82979 210 aaKnown RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 TRMT1LQ7Z2T5 733 aaKnown RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 PPP1R42Q7Z4L9 355 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
KPNB1-201ENST00000290158 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 CPSF2Q9P2I0 782 aaKnown RBP11.7□□□□□ -0.54
KPNB1-201ENST00000290158 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
KPNB1-201ENST00000290158 CTAGE5O15320 804 aa11.69□□□□□ -0.54
KPNB1-201ENST00000290158 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
KPNB1-201ENST00000290158 IGSF3O75054 1194 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms