RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PLIN1O60240 522 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 DNAAF4Q8WXU2 420 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 PHAXQ9H814 394 aaKnown RBP10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 EIF5P55010 431 aaKnown RBP10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 KIF6Q6ZMV9 814 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
PTPDC1-201ENST00000288976 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
PTPDC1-201ENST00000288976 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
PTPDC1-201ENST00000288976 MAP3K15Q6ZN16 1313 aa10.62□□□□□ -0.71
PTPDC1-201ENST00000288976 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
PTPDC1-201ENST00000288976 XAGE3Q8WTP9 111 aa10.62□□□□□ -0.71
PTPDC1-201ENST00000288976 UTYO14607 1347 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 RPS6KA4O75676 772 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 RLBP1P12271 317 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 C20orf194Q5TEA3 1177 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 TMEM57Q8N5G2 664 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 CRBNQ96SW2 442 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 A1BGP04217 495 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 BEND3Q5T5X7 828 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 ZBTB1Q9Y2K1 713 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 MYL6BP14649 208 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 COPS6Q7L5N1 327 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
PTPDC1-201ENST00000288976 SSFA2P28290 1259 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 APBA3O96018 575 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 TCERG1O14776 1098 aaKnown RBP10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 FKBP8Q14318 412 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 TXNRD1Q16881 649 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 SRCIN1Q9C0H9 1055 aa10.6□□□□□ -0.71
PTPDC1-201ENST00000288976 PI4KAP2A4QPH2 592 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 NEXNQ0ZGT2 675 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 PI4KAP1Q8N8J0 262 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 CAMKK2Q96RR4 588 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 NRXN2Q9P2S2 1712 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 TRIM28Q13263 835 aaKnown RBP10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 ZBTB7BO15156 539 aaPredicted RBP10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
PTPDC1-201ENST00000288976 FLAD1Q8NFF5 587 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 GNAI3P08754 354 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 BAG6P46379 1132 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 ZBTB40Q9NUA8 1239 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 TNNQ9UQP3 1299 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 AK7Q96M32 723 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 RIC1Q4ADV7 1423 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 CAMTA2O94983 1202 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 ISCA1Q9BUE6 129 aa10.58□□□□□ -0.72
PTPDC1-201ENST00000288976 ANXA1P04083 346 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 CCDC191Q8NCU4 936 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 PROM2Q8N271 834 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 MYH3P11055 1940 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 KAT6BQ8WYB5 2073 aa10.57□□□□□ -0.72
PTPDC1-201ENST00000288976 TCIRG1Q13488 830 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 TTLL7Q6ZT98 887 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 F6X3S4 739 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 AIMP1Q12904 312 aaKnown RBP10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 PARP10Q53GL7 1025 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 GNPATO15228 680 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 ZNF34Q8IZ26 560 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 CDHR2Q9BYE9 1310 aa10.56□□□□□ -0.72
PTPDC1-201ENST00000288976 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 IGKV5-2P06315 115 aa10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 MYD88Q99836 296 aa10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 LRP5O75197 1615 aa10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 GCKRQ14397 625 aa10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
PTPDC1-201ENST00000288976 SLC4A10Q6U841 1118 aa10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 GNAI2P04899 355 aa10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 PLA2G12BQ9BX93 195 aa10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 GRM8O00222 908 aa10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 UPF2Q9HAU5 1272 aaKnown RBP10.54□□□□□ -0.72
PTPDC1-201ENST00000288976 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms