RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-201ENST00000286835 ADGRB1O14514 1584 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 MED14O60244 1454 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-201ENST00000286835 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
SCAF4-201ENST00000286835 TPM3P06753 285 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 HSPA4P34932 840 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 ANO6Q4KMQ2 910 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
SCAF4-201ENST00000286835 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
SCAF4-201ENST00000286835 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
SCAF4-201ENST00000286835 TNNT1P13805 278 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCAF4-201ENST00000286835 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
SCAF4-201ENST00000286835 SGSM2O43147 1006 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 ZSCAN31Q96LW9 406 aaPredicted RBP15.87■□□□□ 0.13
SCAF4-201ENST00000286835 SETBP1Q9Y6X0 1596 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 U2AF2P26368 475 aaKnown RBP eCLIP15.87■□□□□ 0.133e-9■■■□□ 16.3
SCAF4-201ENST00000286835 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 CDK11BP21127 795 aaKnown RBP15.87■□□□□ 0.13
SCAF4-201ENST00000286835 IL25Q9H293 177 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 PYCARDQ9ULZ3 195 aa15.87■□□□□ 0.13
SCAF4-201ENST00000286835 NRDCO43847 1150 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 KRT28Q7Z3Y7 464 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 LRRC2Q9BYS8 371 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 LARGE1O95461 756 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 ZNF165P49910 485 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 TBX22Q9Y458 520 aa15.86■□□□□ 0.13
SCAF4-201ENST00000286835 RBM8AQ9Y5S9 174 aaKnown RBP15.86■□□□□ 0.13
SCAF4-201ENST00000286835 GUCY1B3Q02153 619 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 GORABQ5T7V8 394 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 CCDC73Q6ZRK6 1079 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 SDF4Q9BRK5 362 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 TYRO3Q06418 890 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 NRXN1Q9ULB1 1477 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 RAD50Q92878 1312 aa15.85■□□□□ 0.13
SCAF4-201ENST00000286835 MYL6BP14649 208 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
SCAF4-201ENST00000286835 PTH1RQ03431 593 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 LRMPQ12912 555 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 SH2B1Q9NRF2 756 aaPredicted RBP15.84■□□□□ 0.13
SCAF4-201ENST00000286835 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 KCNH5Q8NCM2 988 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 FAM200AQ8TCP9 573 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 ATP10DQ9P241 1426 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 ABCC3O15438 1527 aa15.84■□□□□ 0.13
SCAF4-201ENST00000286835 HOMER1Q86YM7 354 aa15.83■□□□□ 0.12
SCAF4-201ENST00000286835 HDAC5Q9UQL6 1122 aa15.83■□□□□ 0.12
SCAF4-201ENST00000286835 NEXNQ0ZGT2 675 aa15.83■□□□□ 0.12
SCAF4-201ENST00000286835 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
SCAF4-201ENST00000286835 LIG1P18858 919 aa15.83■□□□□ 0.12
SCAF4-201ENST00000286835 FAM227BQ96M60 508 aa15.83■□□□□ 0.12
SCAF4-201ENST00000286835 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
SCAF4-201ENST00000286835 ME1P48163 572 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 GNL2Q13823 731 aaKnown RBP15.82■□□□□ 0.12
SCAF4-201ENST00000286835 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
SCAF4-201ENST00000286835 CDC37L1Q7L3B6 337 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 SMAP1Q8IYB5 467 aaPredicted RBP15.82■□□□□ 0.12
SCAF4-201ENST00000286835 CABLES1Q8TDN4 633 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 KIAA0232Q92628 1395 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 MAP3K2Q9Y2U5 619 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 RGS12O14924 1447 aa15.82■□□□□ 0.12
SCAF4-201ENST00000286835 SMC2O95347 1197 aa15.81■□□□□ 0.12
SCAF4-201ENST00000286835 SCAND2PQ9GZW5 306 aaPredicted RBP15.81■□□□□ 0.12
SCAF4-201ENST00000286835 ME3Q16798 604 aa15.81■□□□□ 0.12
SCAF4-201ENST00000286835 CAMSAP1Q5T5Y3 1602 aa15.81■□□□□ 0.12
SCAF4-201ENST00000286835 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
SCAF4-201ENST00000286835 GTF2E1P29083 439 aaPredicted RBP15.8■□□□□ 0.12
SCAF4-201ENST00000286835 MTMR6Q9Y217 621 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 ORAI2Q96SN7 254 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 METP08581 1390 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 PRR36Q9H6K5 1346 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 ERICH4A6NGS2 130 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
SCAF4-201ENST00000286835 CREB3L3Q68CJ9 461 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
SCAF4-201ENST00000286835 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 KLHDC4Q8TBB5 520 aa15.8■□□□□ 0.12
SCAF4-201ENST00000286835 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
SCAF4-201ENST00000286835 ERC1Q8IUD2 1116 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 NDUFB9Q9Y6M9 179 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
SCAF4-201ENST00000286835 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms