RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
RAB3C-201ENST00000282878 RFX1P22670 979 aa4.46□□□□□ -1.69
RAB3C-201ENST00000282878 ALDH1L2Q3SY69 923 aa4.46□□□□□ -1.69
RAB3C-201ENST00000282878 TTC22Q5TAA0 569 aa4.46□□□□□ -1.69
RAB3C-201ENST00000282878 TNPO1Q92973 898 aaKnown RBP4.46□□□□□ -1.69
RAB3C-201ENST00000282878 E9PCH4 1651 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 CCDC30Q5VVM6 783 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 DNAAF4Q8WXU2 420 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 SPATA32Q96LK8 384 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 ABCC4O15439 1325 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 PDE1AP54750 535 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 EVA1CP58658 441 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 BECN1Q14457 450 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 PRPF40BQ6NWY9 871 aaKnown RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 ZCRB1Q8TBF4 217 aaKnown RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 IP6K1Q92551 441 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 NRXN1Q9ULB1 1477 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 PLXNC1O60486 1568 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 TMEM94Q12767 1356 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 AGLP35573 1532 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 CYP27B1O15528 508 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 PRPF40AO75400 957 aaKnown RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 PLEKHO1Q53GL0 409 aaPredicted RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 GOLGA6L1Q8N7Z2 621 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 MICAL1Q8TDZ2 1067 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 CEP89Q96ST8 783 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 MAGEC2Q9UBF1 373 aaPredicted RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 DIP2BQ9P265 1576 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 RNF17Q9BXT8 1623 aaKnown RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 GNAI2P04899 355 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 CHST3Q7LGC8 479 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 APBB1IPQ7Z5R6 666 aaPredicted RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 GAS2L3Q86XJ1 694 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 DCTPP1Q9H773 170 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 TBC1D2BQ9UPU7 963 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 IGSF1Q8N6C5 1336 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 USP6P35125 1406 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 KCNA1Q09470 495 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 MEX3CQ5U5Q3 659 aaKnown RBP4.46□□□□□ -1.7
RAB3C-201ENST00000282878 AACSQ86V21 672 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 RHPN1Q8TCX5 695 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 KIF2CQ99661 725 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 LMTK2Q8IWU2 1503 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 RTL1A6NKG5 1358 aa4.46□□□□□ -1.7
RAB3C-201ENST00000282878 CABP4P57796 275 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 RASEFQ8IZ41 740 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 CXorf38Q8TB03 319 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 FAM227BQ96M60 508 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 PNPLA6Q8IY17 1366 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ALKQ9UM73 1620 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ZFYVE9O95405 1425 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 KIF4AO95239 1232 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 MX1P20591 662 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 HMGN5P82970 282 aaKnown RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 PTH1RQ03431 593 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 BIRC2Q13490 618 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 BIN2Q9UBW5 565 aaPredicted RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 JAG2Q9Y219 1238 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 SREK1Q8WXA9 508 aaKnown RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 SPOCK3Q9BQ16 436 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 NEXMIFQ5QGS0 1516 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 IQGAP3Q86VI3 1631 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 TIMM10P62072 90 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ARHGEF25Q86VW2 580 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 EDC4Q6P2E9 1401 aaKnown RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 IQSEC2Q5JU85 1478 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 FLT4P35916 1363 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 PTF1AQ7RTS3 328 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 FAM135BQ49AJ0 1406 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 INO80Q9ULG1 1556 aaPredicted RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 PLEKHG1Q9ULL1 1385 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 WTIPA6NIX2 430 aaPredicted RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 INTS3Q68E01 1043 aaKnown RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 DDX11Q96FC9 970 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ZHX3Q9H4I2 956 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ANTXR1Q9H6X2 564 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 ZFYVE27Q5T4F4 411 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 GCC1Q96CN9 775 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 LRRCC1Q9C099 1032 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 CPSF1Q10570 1443 aaKnown RBP4.45□□□□□ -1.7
RAB3C-201ENST00000282878 NSD2O96028 1365 aa4.45□□□□□ -1.7
RAB3C-201ENST00000282878 TATP17735 454 aaPredicted RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 NAP1L1P55209 391 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 CALD1Q05682 793 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 TTC5Q8N0Z6 440 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 PPME1Q9Y570 386 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 PIK3C2BO00750 1634 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 MKRN3Q13064 507 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 OTUD7BQ6GQQ9 843 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 DNAJC10Q8IXB1 793 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 HS6ST3Q8IZP7 471 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 SH3BGRP55822 239 aaPredicted RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 LRRC24Q50LG9 513 aa4.44□□□□□ -1.7
RAB3C-201ENST00000282878 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 RPAP2Q8IXW5 612 aaPredicted RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 PAIP2Q9BPZ3 127 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 BICC1Q9H694 974 aaKnown RBP4.44□□□□□ -1.7
RAB3C-201ENST00000282878 GPHNQ9NQX3 736 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms