RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 GBP4Q96PP9 640 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 NUTM2BA6NNL0 878 aaPredicted RBP7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 NUTM2EB1AL46 878 aaPredicted RBP7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 RAB11FIP3O75154 756 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 NUTM2AQ8IVF1 878 aaPredicted RBP7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 KDM4FA0A1W2PPD8 638 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 NEURL1BA8MQ27 555 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 HSP90AB4PQ58FF6 505 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 EAF2Q96CJ1 260 aaPredicted RBP7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 KAZALD1Q96I82 304 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 TCEANC2Q96MN5 208 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 TAOK2Q9UL54 1235 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 KDM6AO15550 1401 aaPredicted RBP7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 ALDH1L1O75891 902 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 CHGBP05060 677 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 POLA2Q14181 598 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 GCKRQ14397 625 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 PI4K2BQ8TCG2 481 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 GPATCH3Q96I76 525 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 FSD1Q9BTV5 496 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 OSBPL3Q9H4L5 887 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 TNS3Q68CZ2 1445 aa7.34□□□□□ -1.23
TNFSF4-201ENST00000281834 PRKCSHP14314 528 aaPredicted RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 IL2RBP14784 551 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 GPTP24298 496 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 LMBR1LQ6UX01 489 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 TMX3Q96JJ7 454 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 ECHDC1Q9NTX5 307 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 DDX49Q9Y6V7 483 aaKnown RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 VIRMAQ69YN4 1812 aaKnown RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 GOLGA6L22H0YM25 854 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 GLRX3O76003 335 aaKnown RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 SASH1O94885 1247 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 PIP4K2BP78356 416 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 PRPF40BQ6NWY9 871 aaKnown RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 ZNF594Q96JF6 807 aaPredicted RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 FAM227BQ96M60 508 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 MARF1Q9Y4F3 1742 aaKnown RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 METTL22Q9BUU2 404 aaPredicted RBP7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 PANK2Q9BZ23 570 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 ASAP1Q9ULH1 1129 aa7.33□□□□□ -1.24
TNFSF4-201ENST00000281834 GOLGA6L3A6NEY3 463 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 EIF5BO60841 1220 aaKnown RBP7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 TMOD3Q9NYL9 352 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 WDR17Q8IZU2 1322 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 SALL3Q9BXA9 1300 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 NBPF26B4DH59 902 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 TFCP2Q12800 502 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 NBPF14Q5TI25 921 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 NBPF10Q6P3W6 841 aaKnown RBP7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 GDPD2Q9HCC8 539 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 STAP2Q9UGK3 403 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 MED1Q15648 1581 aaPredicted RBP7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 CASTP20810 708 aaKnown RBP7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 PTH1RQ03431 593 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 SLFNL1Q499Z3 407 aa7.32□□□□□ -1.24
TNFSF4-201ENST00000281834 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 DNAJC10Q8IXB1 793 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 ACSBG1Q96GR2 724 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 JAKMIP1Q96N16 626 aaKnown RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 HDAC5Q9UQL6 1122 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 PCDH11XQ9BZA7 1347 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 PCDH11YQ9BZA8 1340 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 TIMM10P62072 90 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 ERC1Q8IUD2 1116 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 SYNE4Q8N205 404 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 FAM89AQ96GI7 184 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 NAP1L2Q9ULW6 460 aaPredicted RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 RGPD5Q99666 1765 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 SGSM2O43147 1006 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 NMIQ13287 307 aaPredicted RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 CAVIN1Q6NZI2 390 aaKnown RBP7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 DBNDD2Q9BQY9 259 aa7.31□□□□□ -1.24
TNFSF4-201ENST00000281834 ZNF142P52746 1687 aaPredicted RBP7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 AK9Q5TCS8 1911 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 SNRKQ9NRH2 765 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 GOLGB1Q14789 3259 aaKnown RBP7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 STK3Q13188 491 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 NCAPD2Q15021 1401 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 GORABQ5T7V8 394 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 CCDC129Q6ZRS4 1044 aa7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 CIZ1Q9ULV3 898 aaPredicted RBP7.3□□□□□ -1.24
TNFSF4-201ENST00000281834 SLIT3O75094 1523 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 A0A0D9SFI3 127 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 ADCK5Q3MIX3 580 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 SEC62Q99442 399 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 TBC1D2BQ9UPU7 963 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 NUCB2P80303 420 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms