RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 POTEFA5A3E0 1075 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 TIE1P35590 1138 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.86□□□□□ -1.79
HERC4-201ENST00000277817 CLSPNQ9HAW4 1339 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 TTLL13PA6NNM8 815 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 C21orf2O43822 256 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 CBLBQ13191 982 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 RELTQ969Z4 430 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 TUBGCP6Q96RT7 1819 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 U2SURPO15042 1029 aaKnown RBP3.86□□□□□ -1.79
HERC4-201ENST00000277817 AP1G2O75843 785 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 AMPD3Q01432 767 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 JMYQ8N9B5 988 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 LRRN4Q8WUT4 740 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 FAM129BQ96TA1 746 aa3.86□□□□□ -1.79
HERC4-201ENST00000277817 DDX41Q9UJV9 622 aaKnown RBP3.86□□□□□ -1.79
HERC4-201ENST00000277817 BCL9O00512 1426 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 THSD7BQ9C0I4 1608 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 CTSHP09668 335 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 GJA8P48165 433 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 POTEAQ6S8J7 498 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 WEE1P30291 646 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 CDCA8Q53HL2 280 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 PCDH12Q9NPG4 1184 aa3.85□□□□□ -1.79
HERC4-201ENST00000277817 PXDNQ92626 1479 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 RACK1P63244 317 aaKnown RBP3.84□□□□□ -1.79
HERC4-201ENST00000277817 DESI1Q6ICB0 168 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 UBA5Q9GZZ9 404 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 ZBTB3Q9H5J0 574 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 RNF19AQ9NV58 838 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 TMA7Q9Y2S6 64 aaKnown RBP3.84□□□□□ -1.79
HERC4-201ENST00000277817 F12P00748 615 aaPredicted RBP3.84□□□□□ -1.79
HERC4-201ENST00000277817 XRCC5P13010 732 aaKnown RBP3.84□□□□□ -1.79
HERC4-201ENST00000277817 ATP2B4P23634 1241 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 SLAIN1Q8ND83 568 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 TMC2Q8TDI7 906 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 VTI1AQ96AJ9 217 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 PRKAG2Q9UGJ0 569 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 NPHP4O75161 1426 aaPredicted RBP3.84□□□□□ -1.79
HERC4-201ENST00000277817 ROCK1Q13464 1354 aa3.84□□□□□ -1.79
HERC4-201ENST00000277817 EVA1CP58658 441 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 HNRNPUQ00839 825 aaKnown RBP eCLIP3.84□□□□□ -1.8
HERC4-201ENST00000277817 NOL8Q76FK4 1167 aaKnown RBP3.84□□□□□ -1.8
HERC4-201ENST00000277817 FAM9BQ8IZU0 186 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 DHX38Q92620 1227 aaKnown RBP3.84□□□□□ -1.8
HERC4-201ENST00000277817 TMEM106CQ9BVX2 250 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 CHPF2Q9P2E5 772 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 TONSLQ96HA7 1378 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 MYOM2P54296 1465 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 BRCA1P38398 1863 aaKnown RBP3.84□□□□□ -1.8
HERC4-201ENST00000277817 ADAMTS13Q76LX8 1427 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 FOSBP53539 338 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 NR1H3Q13133 447 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 SLF2Q8IX21 1173 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 TMEM134Q9H6X4 195 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 DNMT3AQ9Y6K1 912 aaPredicted RBP3.84□□□□□ -1.8
HERC4-201ENST00000277817 DLEC1Q9Y238 1755 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 ARFGEF2Q9Y6D5 1785 aa3.84□□□□□ -1.8
HERC4-201ENST00000277817 MON2Q7Z3U7 1717 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 NHSQ6T4R5 1651 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 USP17L5A8MUK1 530 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 GCGRP47871 477 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 RASGRP4Q8TDF6 673 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 THRAP3Q9Y2W1 955 aaKnown RBP3.83□□□□□ -1.8
HERC4-201ENST00000277817 TMC7Q7Z402 723 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 ZMYM3Q14202 1370 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 KCNQ2O43526 872 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 PHF12Q96QT6 1004 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 MSRB2Q9Y3D2 182 aa3.83□□□□□ -1.8
HERC4-201ENST00000277817 ADAMTS7Q9UKP4 1686 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 RCCD1A6NED2 376 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 POTEIP0CG38 1075 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 NT5DC4Q86YG4 428 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 RNPC3Q96LT9 517 aaKnown RBP3.82□□□□□ -1.8
HERC4-201ENST00000277817 BMP2KQ9NSY1 1161 aaPredicted RBP3.82□□□□□ -1.8
HERC4-201ENST00000277817 PLEKHG1Q9ULL1 1385 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 SALL2Q9Y467 1007 aaPredicted RBP3.82□□□□□ -1.8
HERC4-201ENST00000277817 M0R2N6 131 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 TYW1BQ6NUM6 668 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.82□□□□□ -1.8
HERC4-201ENST00000277817 OSBPL2Q9H1P3 480 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 ACBD3Q9H3P7 528 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 ATRNO75882 1429 aa3.82□□□□□ -1.8
HERC4-201ENST00000277817 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 EVX2Q03828 476 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 C8orf48Q96LL4 319 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 DNAJC2Q99543 621 aaKnown RBP3.81□□□□□ -1.8
HERC4-201ENST00000277817 MYH16Q9H6N6 1097 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 C12orf49Q9H741 205 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 DDX56Q9NY93 547 aaKnown RBP3.81□□□□□ -1.8
HERC4-201ENST00000277817 DMGDHQ9UI17 866 aaKnown RBP3.81□□□□□ -1.8
HERC4-201ENST00000277817 FGAP02671 866 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 TBX4P57082 545 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 USP46P62068 366 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 NBPF6Q5VWK0 638 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 KIAA0907Q7Z7F0 614 aaPredicted RBP3.81□□□□□ -1.8
HERC4-201ENST00000277817 NBPF4Q96M43 638 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 TMX1Q9H3N1 280 aa3.81□□□□□ -1.8
HERC4-201ENST00000277817 RRP7BPQ9NSQ0 103 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms