RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 NYAP1Q6ZVC0 841 aa10.93□□□□□ -0.66
HMGCLL1-201ENST00000274901 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 SLC26A8Q96RN1 970 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 NOL10Q9BSC4 688 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 TRIM5Q9C035 493 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 FHOD1Q9Y613 1164 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 HSPA4P34932 840 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 NEK11Q8NG66 645 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 CABP1Q9NZU7 370 aa10.92□□□□□ -0.66
HMGCLL1-201ENST00000274901 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 POLKQ9UBT6 870 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 SNX14Q9Y5W7 946 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 UBR1Q8IWV7 1749 aa10.91□□□□□ -0.66
HMGCLL1-201ENST00000274901 PTPRCP08575 1304 aa10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 H2AFXP16104 143 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 PUS7Q96PZ0 661 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 NUP62CLQ9H1M0 184 aa10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 C3P01024 1663 aa10.9□□□□□ -0.66
HMGCLL1-201ENST00000274901 SSH2Q76I76 1423 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 MAP4K4O95819 1239 aaPredicted RBP10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 GJB2P29033 226 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 ERCC6LQ2NKX8 1250 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 LRRC8AQ8IWT6 810 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 TDRD7Q8NHU6 1098 aaKnown RBP10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 ERO1AQ96HE7 468 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.67
HMGCLL1-201ENST00000274901 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 F6X3S4 739 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 LCMT1Q9UIC8 334 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 FER1L4A9Z1Z3 1794 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 CLCN6P51797 869 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 FERMT3Q86UX7 667 aa10.89□□□□□ -0.67
HMGCLL1-201ENST00000274901 AATKQ6ZMQ8 1374 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 VPS37CA5D8V6 355 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 TRIM66O15016 1216 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 PNMA6AP0CW24 399 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 ST5P78524 1137 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCZ1BP86790 482 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCZ1P86791 482 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 COL9A3Q14050 684 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 PTPN14Q15678 1187 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 RGS22Q8NE09 1264 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 TMX1Q9H3N1 280 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 EMILIN1Q9Y6C2 1016 aa10.88□□□□□ -0.67
HMGCLL1-201ENST00000274901 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 SLU7O95391 586 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 G2E3Q7L622 706 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 TERF2IPQ9NYB0 399 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 A0A087WWV3 80 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 GYS2P54840 703 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 SYT10Q6XYQ8 523 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 ADAMTS13Q76LX8 1427 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCDC171Q6TFL3 1326 aa10.87□□□□□ -0.67
HMGCLL1-201ENST00000274901 WASLO00401 505 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 POLR3GO15318 223 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 SKILP12757 684 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 IL13P35225 146 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 CDC37L1Q7L3B6 337 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 HYPKQ9NX55 129 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 RSPH14Q9UHP6 348 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 KIF20BQ96Q89 1820 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 ZNF165P49910 485 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCAR2Q8N163 923 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 SMARCE1Q969G3 411 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 LRRCC1Q9C099 1032 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 LSG1Q9H089 658 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 ATP6V1DQ9Y5K8 247 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
HMGCLL1-201ENST00000274901 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
HMGCLL1-201ENST00000274901 HMMRO75330 724 aa10.85□□□□□ -0.67
HMGCLL1-201ENST00000274901 NR1I2O75469 434 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms