RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 TRIM6-TRIM34B2RNG4 842 aa24.74■■□□□ 1.55
UBE2F-201ENST00000272930 CHMLP26374 656 aa24.74■■□□□ 1.55
UBE2F-201ENST00000272930 ANKRD13DQ6ZTN6 518 aa24.74■■□□□ 1.55
UBE2F-201ENST00000272930 KCPQ6ZWJ8 1503 aa24.74■■□□□ 1.55
UBE2F-201ENST00000272930 ERBB4Q15303 1308 aa24.74■■□□□ 1.55
UBE2F-201ENST00000272930 GCKRQ14397 625 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 UNC5CLQ8IV45 518 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 RILPL2Q969X0 211 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 ERC1Q8IUD2 1116 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 BICC1Q9H694 974 aaKnown RBP24.73■■□□□ 1.55
UBE2F-201ENST00000272930 STRN4Q9NRL3 753 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 TOGARAM1Q9Y4F4 1720 aa24.73■■□□□ 1.55
UBE2F-201ENST00000272930 MYD88Q99836 296 aa24.72■■□□□ 1.55
UBE2F-201ENST00000272930 EVA1CP58658 441 aa24.71■■□□□ 1.55
UBE2F-201ENST00000272930 OS9Q13438 667 aaPredicted RBP24.71■■□□□ 1.55
UBE2F-201ENST00000272930 CIZ1Q9ULV3 898 aaPredicted RBP24.71■■□□□ 1.55
UBE2F-201ENST00000272930 TTC41PQ6P2S7 1318 aa24.71■■□□□ 1.55
UBE2F-201ENST00000272930 TNS2Q63HR2 1409 aa24.7■■□□□ 1.55
UBE2F-201ENST00000272930 NUP188Q5SRE5 1749 aa24.7■■□□□ 1.54
UBE2F-201ENST00000272930 CLASRPQ8N2M8 674 aaKnown RBP24.69■■□□□ 1.54
UBE2F-201ENST00000272930 PA2G4Q9UQ80 394 aaKnown RBP24.69■■□□□ 1.54
UBE2F-201ENST00000272930 COL15A1P39059 1388 aa24.69■■□□□ 1.54
UBE2F-201ENST00000272930 COL14A1Q05707 1796 aaKnown RBP24.69■■□□□ 1.54
UBE2F-201ENST00000272930 PIP4K2AP48426 406 aaPredicted RBP24.69■■□□□ 1.54
UBE2F-201ENST00000272930 GSE1Q14687 1217 aa24.68■■□□□ 1.54
UBE2F-201ENST00000272930 ROBO1Q9Y6N7 1651 aa24.68■■□□□ 1.54
UBE2F-201ENST00000272930 PLBD2Q8NHP8 589 aa24.68■■□□□ 1.54
UBE2F-201ENST00000272930 COL22A1Q8NFW1 1626 aaPredicted RBP24.67■■□□□ 1.54
UBE2F-201ENST00000272930 EPB41L2O43491 1005 aaKnown RBP24.67■■□□□ 1.54
UBE2F-201ENST00000272930 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
UBE2F-201ENST00000272930 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
UBE2F-201ENST00000272930 NBPF14Q5TI25 921 aa24.66■■□□□ 1.54
UBE2F-201ENST00000272930 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
UBE2F-201ENST00000272930 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
UBE2F-201ENST00000272930 AHDC1Q5TGY3 1603 aaPredicted RBP24.66■■□□□ 1.54
UBE2F-201ENST00000272930 GLRX3O76003 335 aaKnown RBP24.66■■□□□ 1.54
UBE2F-201ENST00000272930 CNTROBQ8N137 903 aa24.64■■□□□ 1.54
UBE2F-201ENST00000272930 IL17RAQ96F46 866 aa24.64■■□□□ 1.54
UBE2F-201ENST00000272930 SASH1O94885 1247 aa24.64■■□□□ 1.53
UBE2F-201ENST00000272930 HSP90AA1P07900 732 aaKnown RBP24.64■■□□□ 1.53
UBE2F-201ENST00000272930 MCM4P33991 863 aa24.64■■□□□ 1.53
UBE2F-201ENST00000272930 ITGB4P16144 1822 aa24.63■■□□□ 1.53
UBE2F-201ENST00000272930 ST18O60284 1047 aa24.63■■□□□ 1.53
UBE2F-201ENST00000272930 G3BP1Q13283 466 aaKnown RBP eCLIP24.63■■□□□ 1.53
UBE2F-201ENST00000272930 EPHA10Q5JZY3 1008 aa24.63■■□□□ 1.53
UBE2F-201ENST00000272930 ECHDC1Q9NTX5 307 aa24.63■■□□□ 1.53
UBE2F-201ENST00000272930 PLCH1Q4KWH8 1693 aa24.63■■□□□ 1.53
UBE2F-201ENST00000272930 ANAPC15P60006 121 aa24.62■■□□□ 1.53
UBE2F-201ENST00000272930 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
UBE2F-201ENST00000272930 BTG4Q9NY30 223 aa24.62■■□□□ 1.53
UBE2F-201ENST00000272930 COL16A1Q07092 1604 aaPredicted RBP24.62■■□□□ 1.53
UBE2F-201ENST00000272930 MCCP23508 829 aa24.62■■□□□ 1.53
UBE2F-201ENST00000272930 RABL6Q3YEC7 729 aaPredicted RBP24.62■■□□□ 1.53
UBE2F-201ENST00000272930 GPATCH3Q96I76 525 aa24.62■■□□□ 1.53
UBE2F-201ENST00000272930 TJP1Q07157 1748 aa24.61■■□□□ 1.53
UBE2F-201ENST00000272930 DISP2A7MBM2 1401 aa24.61■■□□□ 1.53
UBE2F-201ENST00000272930 MAP4K4O95819 1239 aaPredicted RBP24.61■■□□□ 1.53
UBE2F-201ENST00000272930 IFIT2P09913 472 aaKnown RBP24.61■■□□□ 1.53
UBE2F-201ENST00000272930 RAB3GAP1Q15042 981 aa24.61■■□□□ 1.53
UBE2F-201ENST00000272930 IL25Q9H293 177 aa24.61■■□□□ 1.53
UBE2F-201ENST00000272930 CASP7P55210 303 aa24.6■■□□□ 1.53
UBE2F-201ENST00000272930 WNK3Q9BYP7 1800 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 AACSQ86V21 672 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 COPRSQ9NQ92 184 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 ATP5J2-PTCD1G3V325 749 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 SGSM2O43147 1006 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
UBE2F-201ENST00000272930 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
UBE2F-201ENST00000272930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.59■■□□□ 1.53
UBE2F-201ENST00000272930 A1BGP04217 495 aa24.58■■□□□ 1.53
UBE2F-201ENST00000272930 RFX5P48382 616 aaPredicted RBP24.58■■□□□ 1.53
UBE2F-201ENST00000272930 EAF2Q96CJ1 260 aaPredicted RBP24.58■■□□□ 1.53
UBE2F-201ENST00000272930 TMOD3Q9NYL9 352 aa24.58■■□□□ 1.53
UBE2F-201ENST00000272930 A0A087WZG4 1122 aa24.57■■□□□ 1.52
UBE2F-201ENST00000272930 FOXD4L1Q9NU39 408 aa24.57■■□□□ 1.52
UBE2F-201ENST00000272930 PALD1Q9ULE6 856 aa24.57■■□□□ 1.52
UBE2F-201ENST00000272930 TTLL7Q6ZT98 887 aa24.57■■□□□ 1.52
UBE2F-201ENST00000272930 LRP6O75581 1613 aa24.56■■□□□ 1.52
UBE2F-201ENST00000272930 TNPO1Q92973 898 aaKnown RBP24.56■■□□□ 1.52
UBE2F-201ENST00000272930 KLHDC4Q8TBB5 520 aa24.56■■□□□ 1.52
UBE2F-201ENST00000272930 SIL1Q9H173 461 aa24.56■■□□□ 1.52
UBE2F-201ENST00000272930 RAD50Q92878 1312 aa24.55■■□□□ 1.52
UBE2F-201ENST00000272930 H7C1W4 665 aa24.55■■□□□ 1.52
UBE2F-201ENST00000272930 HSPA4P34932 840 aa24.55■■□□□ 1.52
UBE2F-201ENST00000272930 PTPN12Q05209 780 aaKnown RBP24.55■■□□□ 1.52
UBE2F-201ENST00000272930 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
UBE2F-201ENST00000272930 EVI5LQ96CN4 794 aa24.54■■□□□ 1.52
UBE2F-201ENST00000272930 MCM2P49736 904 aa24.53■■□□□ 1.52
UBE2F-201ENST00000272930 NEK4P51957 841 aa24.53■■□□□ 1.52
UBE2F-201ENST00000272930 VSIG10Q8N0Z9 540 aa24.53■■□□□ 1.52
UBE2F-201ENST00000272930 IL27Q8NEV9 243 aa24.53■■□□□ 1.52
UBE2F-201ENST00000272930 LTBP4Q8N2S1 1624 aa24.53■■□□□ 1.52
UBE2F-201ENST00000272930 DDX11L8A8MPP1 907 aa24.52■■□□□ 1.52
UBE2F-201ENST00000272930 PIGBQ92521 554 aa24.52■■□□□ 1.52
UBE2F-201ENST00000272930 LSG1Q9H089 658 aaKnown RBP24.52■■□□□ 1.52
UBE2F-201ENST00000272930 CWC25Q9NXE8 425 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-201ENST00000272930 CCDC8Q9H0W5 538 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-201ENST00000272930 CCDC191Q8NCU4 936 aa24.51■■□□□ 1.51
UBE2F-201ENST00000272930 TEX13AQ9BXU3 409 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-201ENST00000272930 FOXO4P98177 505 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms