RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 CCDC8Q9H0W5 538 aaPredicted RBP13.17□□□□□ -0.3
TCTN3-201ENST00000265993 BRD1O95696 1058 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 PDIA6Q15084 440 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 AACSQ86V21 672 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
TCTN3-201ENST00000265993 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
TCTN3-201ENST00000265993 SYCE3A1L190 88 aa13.16□□□□□ -0.3
TCTN3-201ENST00000265993 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
TCTN3-201ENST00000265993 GRM8O00222 908 aa13.16□□□□□ -0.3
TCTN3-201ENST00000265993 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
TCTN3-201ENST00000265993 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
TCTN3-201ENST00000265993 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 ESPNB1AK53 854 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 SASH1O94885 1247 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 LARGE1O95461 756 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 MCM2P49736 904 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 AK2P54819 239 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
TCTN3-201ENST00000265993 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
TCTN3-201ENST00000265993 SLIT3O75094 1523 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 MTX1Q13505 466 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
TCTN3-201ENST00000265993 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 ECHDC1Q9NTX5 307 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
TCTN3-201ENST00000265993 ZNF445P59923 1031 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
TCTN3-201ENST00000265993 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCTN3-201ENST00000265993 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
TCTN3-201ENST00000265993 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 COPS6Q7L5N1 327 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
TCTN3-201ENST00000265993 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 HYPKQ9NX55 129 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-201ENST00000265993 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-201ENST00000265993 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
TCTN3-201ENST00000265993 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-201ENST00000265993 C5P01031 1676 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 CLCN1P35523 988 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
TCTN3-201ENST00000265993 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 TTC14Q96N46 770 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 MYD88Q99836 296 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 CHGBP05060 677 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 MEGF6O75095 1541 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
TCTN3-201ENST00000265993 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
TCTN3-201ENST00000265993 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
TCTN3-201ENST00000265993 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
TCTN3-201ENST00000265993 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
TCTN3-201ENST00000265993 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
TCTN3-201ENST00000265993 PHKG2P15735 406 aa13.11□□□□□ -0.31
TCTN3-201ENST00000265993 G3BP1Q13283 466 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCTN3-201ENST00000265993 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
TCTN3-201ENST00000265993 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
TCTN3-201ENST00000265993 USP42Q9H9J4 1324 aaKnown RBP13.1□□□□□ -0.31
TCTN3-201ENST00000265993 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 CYP27B1O15528 508 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
TCTN3-201ENST00000265993 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
TCTN3-201ENST00000265993 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 NMIQ13287 307 aaPredicted RBP13.1□□□□□ -0.31
TCTN3-201ENST00000265993 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
TCTN3-201ENST00000265993 TATP17735 454 aaPredicted RBP13.09□□□□□ -0.31
TCTN3-201ENST00000265993 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 SYT1P21579 422 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 KCNJ4P48050 445 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 GCKRQ14397 625 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
TCTN3-201ENST00000265993 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
TCTN3-201ENST00000265993 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms