RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
PDLIM2-201ENST00000265810 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
PDLIM2-201ENST00000265810 PLBD2Q8NHP8 589 aa17.4■□□□□ 0.38
PDLIM2-201ENST00000265810 NBPF5PQ86XG9 351 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-201ENST00000265810 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-201ENST00000265810 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
PDLIM2-201ENST00000265810 TRIM44Q96DX7 344 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-201ENST00000265810 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 PTMSP20962 102 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-201ENST00000265810 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 PDE1AP54750 535 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 AKAP17AQ02040 695 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 ZSCAN25Q6NSZ9 544 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 MYO3AQ8NEV4 1616 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 ERICH2A1L162 156 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 RAI14Q9P0K7 980 aa17.37■□□□□ 0.37
PDLIM2-201ENST00000265810 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
PDLIM2-201ENST00000265810 GNPATO15228 680 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 RAD21O60216 631 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 TRIM34Q9BYJ4 488 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 CYP27B1O15528 508 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 VPS37CA5D8V6 355 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 ABCC4O15439 1325 aa17.35■□□□□ 0.37
PDLIM2-201ENST00000265810 SLIT1O75093 1534 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 SDSP20132 328 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 SLC5A1P13866 664 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 ARHGAP23Q9P227 1491 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 ATP6V1DQ9Y5K8 247 aa17.34■□□□□ 0.37
PDLIM2-201ENST00000265810 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-201ENST00000265810 SIGLEC1Q9BZZ2 1709 aa17.33■□□□□ 0.36
PDLIM2-201ENST00000265810 GOLIM4O00461 696 aa17.33■□□□□ 0.36
PDLIM2-201ENST00000265810 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.36
PDLIM2-201ENST00000265810 MCM2P49736 904 aa17.33■□□□□ 0.36
PDLIM2-201ENST00000265810 EVI5LQ96CN4 794 aa17.33■□□□□ 0.36
PDLIM2-201ENST00000265810 FOSBP53539 338 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 GCKRQ14397 625 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 IL15P40933 162 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 JAKMIP1Q96N16 626 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-201ENST00000265810 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 NUCB2P80303 420 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 KLHDC4Q8TBB5 520 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 KIF13AQ9H1H9 1805 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 FAM182BQ5T319 152 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
PDLIM2-201ENST00000265810 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 BLOC1S2Q6QNY1 142 aa17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
PDLIM2-201ENST00000265810 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
PDLIM2-201ENST00000265810 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms