RNA–Protein interactions for RNA: ENST00000265361.7

SEMA3C-201, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3C, Length 5,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-201ENST00000265361 KIF5CO60282 957 aa20.43■□□□□ 0.86
SEMA3C-201ENST00000265361 LUZP1Q86V48 1076 aa20.43■□□□□ 0.86
SEMA3C-201ENST00000265361 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
SEMA3C-201ENST00000265361 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 SLC12A7Q9Y666 1083 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 TRAPPC8Q9Y2L5 1435 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 CCDC194A0A1B0GVG4 234 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 TAF7Q15545 349 aaPredicted RBP20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 ADGRL2O95490 1459 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 ZNF213O14771 459 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 TRMT112Q9UI30 125 aaKnown RBP20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 SHANK2Q9UPX8 1470 aa20.42■□□□□ 0.86
SEMA3C-201ENST00000265361 UHRF1BP1Q6BDS2 1440 aa20.41■□□□□ 0.86
SEMA3C-201ENST00000265361 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
SEMA3C-201ENST00000265361 FANCAO15360 1455 aa20.41■□□□□ 0.86
SEMA3C-201ENST00000265361 PLCH2O75038 1416 aa20.41■□□□□ 0.86
SEMA3C-201ENST00000265361 RRAGDQ9NQL2 400 aaPredicted RBP20.41■□□□□ 0.86
SEMA3C-201ENST00000265361 SMARCA5O60264 1052 aaPredicted RBP20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 AMOTQ4VCS5 1084 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 MACROD2A1Z1Q3 448 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 SLC5A1P13866 664 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 HOOK3Q86VS8 718 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 GUCY1B3Q02153 619 aa20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 TNPO1Q92973 898 aaKnown RBP20.4■□□□□ 0.86
SEMA3C-201ENST00000265361 PAFAH1B1P43034 410 aa20.39■□□□□ 0.86
SEMA3C-201ENST00000265361 SLF2Q8IX21 1173 aa20.39■□□□□ 0.86
SEMA3C-201ENST00000265361 CCDC8Q9H0W5 538 aaPredicted RBP20.39■□□□□ 0.86
SEMA3C-201ENST00000265361 MAP9Q49MG5 647 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 CTNNBL1Q8WYA6 563 aaPredicted RBP20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 GOLGA6L10A0A0M3HER8 536 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 URI1O94763 535 aaPredicted RBP20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 CCDC150Q8NCX0 1101 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 KIF18AQ8NI77 898 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 USO1O60763 962 aaKnown RBP20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 NLRP5P59047 1200 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 TDRD12Q587J7 1177 aaKnown RBP20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.85
SEMA3C-201ENST00000265361 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 IFFO1Q0D2I5 559 aa20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 CETN1Q12798 172 aa20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 CCDC178Q5BJE1 867 aa20.38■□□□□ 0.85
SEMA3C-201ENST00000265361 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 CCDC183Q5T5S1 534 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 SHTN1A0MZ66 631 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 DNA2P51530 1060 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 ANKRD18BA2A2Z9 1011 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 CNNM3Q8NE01 707 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 A2MP01023 1474 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 GOLGA8AA7E2F4 631 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 GOLGA8BA8MQT2 603 aa20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 PPM1FP49593 454 aaPredicted RBP20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
SEMA3C-201ENST00000265361 NUP160Q12769 1436 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 SSRP1Q08945 709 aaKnown RBP20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 EHMT1Q9H9B1 1298 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 CATIPQ7Z7H3 387 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 IDI1Q13907 227 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 NUP88Q99567 741 aaPredicted RBP20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 CTAGE5O15320 804 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 CD109Q6YHK3 1445 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
SEMA3C-201ENST00000265361 ERICH4A6NGS2 130 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 YEATS4O95619 227 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 MYCNP04198 464 aaPredicted RBP20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 MCM3P25205 808 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 CTNNA2P26232 953 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 TMEM87AQ8NBN3 555 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 A0A087WZG4 1122 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 CPLX3Q8WVH0 158 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 LIMCH1Q9UPQ0 1083 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 SPECC1Q5M775 1068 aa20.35■□□□□ 0.85
SEMA3C-201ENST00000265361 STAMBPO95630 424 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 CASQ1P31415 396 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 C6orf229H3BNL8 230 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 IDEP14735 1019 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 GOPCQ9HD26 462 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 C14orf93Q9H972 538 aaKnown RBP20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 TCP11L1Q9NUJ3 509 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 SSFA2P28290 1259 aa20.34■□□□□ 0.85
SEMA3C-201ENST00000265361 F6X3S4 739 aa20.33■□□□□ 0.85
SEMA3C-201ENST00000265361 LIG1P18858 919 aa20.33■□□□□ 0.85
SEMA3C-201ENST00000265361 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.85
SEMA3C-201ENST00000265361 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
SEMA3C-201ENST00000265361 KDM5BQ9UGL1 1544 aa20.33■□□□□ 0.85
SEMA3C-201ENST00000265361 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms