RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
PKP1-201ENST00000263946 LINS1Q8NG48 757 aa13.56□□□□□ -0.24
PKP1-201ENST00000263946 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
PKP1-201ENST00000263946 SEC24BO95487 1268 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 SSFA2P28290 1259 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 LEKR1Q6ZMV7 388 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
PKP1-201ENST00000263946 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
PKP1-201ENST00000263946 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
PKP1-201ENST00000263946 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 ABCF2Q9UG63 623 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
PKP1-201ENST00000263946 TSPYL1Q9H0U9 437 aa13.55□□□□□ -0.24
PKP1-201ENST00000263946 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 ERLIN2O94905 339 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
PKP1-201ENST00000263946 TDO2P48775 406 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
PKP1-201ENST00000263946 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
PKP1-201ENST00000263946 RAI14Q9P0K7 980 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
PKP1-201ENST00000263946 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
PKP1-201ENST00000263946 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
PKP1-201ENST00000263946 USP8P40818 1118 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 ME1P48163 572 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
PKP1-201ENST00000263946 EPS15P42566 896 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
PKP1-201ENST00000263946 KAT6BQ8WYB5 2073 aa13.52□□□□□ -0.24
PKP1-201ENST00000263946 EZRP15311 586 aaKnown RBP13.52□□□□□ -0.24
PKP1-201ENST00000263946 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.24
PKP1-201ENST00000263946 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.24
PKP1-201ENST00000263946 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.24
PKP1-201ENST00000263946 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 GOLIM4O00461 696 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 PDIA4P13667 645 aaKnown RBP13.52□□□□□ -0.25
PKP1-201ENST00000263946 SPATA32Q96LK8 384 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 TRIM5Q9C035 493 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
PKP1-201ENST00000263946 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 PLCD4Q9BRC7 762 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
PKP1-201ENST00000263946 ZNF521Q96K83 1311 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
PKP1-201ENST00000263946 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
PKP1-201ENST00000263946 KIAA0754O94854 1291 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 IL2RBP14784 551 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
PKP1-201ENST00000263946 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
PKP1-201ENST00000263946 GOLGA6L10A6NI86 522 aa13.49□□□□□ -0.25
PKP1-201ENST00000263946 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
PKP1-201ENST00000263946 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
PKP1-201ENST00000263946 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
PKP1-201ENST00000263946 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
PKP1-201ENST00000263946 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
PKP1-201ENST00000263946 ZPR1O75312 459 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 CDKL5O76039 1030 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 NEFHP12036 1026 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 EFCAB6Q5THR3 1501 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 SYCE3A1L190 88 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
PKP1-201ENST00000263946 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
PKP1-201ENST00000263946 SYNMO15061 1565 aa13.48□□□□□ -0.25
PKP1-201ENST00000263946 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
PKP1-201ENST00000263946 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
PKP1-201ENST00000263946 WWC2Q6AWC2 1192 aa13.47□□□□□ -0.25
PKP1-201ENST00000263946 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
PKP1-201ENST00000263946 NAPBQ9H115 298 aa13.47□□□□□ -0.25
PKP1-201ENST00000263946 ABCC3O15438 1527 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms