RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 RGS12O14924 1447 aa16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 GPATCH3Q96I76 525 aa16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
TNFRSF8-201ENST00000263932 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
TNFRSF8-201ENST00000263932 ST18O60284 1047 aa16.34■□□□□ 0.21
TNFRSF8-201ENST00000263932 PKNOX2Q96KN3 472 aa16.34■□□□□ 0.21
TNFRSF8-201ENST00000263932 ATP10DQ9P241 1426 aa16.33■□□□□ 0.21
TNFRSF8-201ENST00000263932 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.21
TNFRSF8-201ENST00000263932 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.21
TNFRSF8-201ENST00000263932 FSD1Q9BTV5 496 aa16.33■□□□□ 0.21
TNFRSF8-201ENST00000263932 LMBR1LQ6UX01 489 aa16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 TOPAZ1Q8N9V7 1692 aa16.33■□□□□ 0.2
TNFRSF8-201ENST00000263932 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 K7ELQ4 463 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 ADCY9O60503 1353 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
TNFRSF8-201ENST00000263932 EXOC5O00471 708 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 KCNQ4P56696 695 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 WDR17Q8IZU2 1322 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 CPA1P15085 419 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 RBM27Q9P2N5 1060 aaKnown RBP16.31■□□□□ 0.2
TNFRSF8-201ENST00000263932 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 MEGF6O75095 1541 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 DNTTIP2Q5QJE6 756 aaKnown RBP16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 HOXB7P09629 217 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 PKP1Q13835 747 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 GCKRQ14397 625 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
TNFRSF8-201ENST00000263932 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 FGD1P98174 961 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 NPHP1O15259 732 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
TNFRSF8-201ENST00000263932 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 CHMLP26374 656 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 RABEP1Q15276 862 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
TNFRSF8-201ENST00000263932 C8orf37Q96NL8 207 aa16.27■□□□□ 0.2
TNFRSF8-201ENST00000263932 LTN1O94822 1766 aa16.27■□□□□ 0.2
TNFRSF8-201ENST00000263932 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
TNFRSF8-201ENST00000263932 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.19
TNFRSF8-201ENST00000263932 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.19
TNFRSF8-201ENST00000263932 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.19
TNFRSF8-201ENST00000263932 TIMM10P62072 90 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 TFCP2Q12800 502 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 PDIA6Q15084 440 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 NGLY1Q96IV0 654 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 EAF2Q96CJ1 260 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 UBAP1LF5GYI3 381 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 PRPF40BQ6NWY9 871 aaKnown RBP16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 NFAT5O94916 1531 aa16.26■□□□□ 0.19
TNFRSF8-201ENST00000263932 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 GLRX3O76003 335 aaKnown RBP16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 FOSBP53539 338 aa16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 RBM10P98175 930 aaKnown RBP16.25■□□□□ 0.19
TNFRSF8-201ENST00000263932 PPFIA3O75145 1194 aa16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 PIGBQ92521 554 aa16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 IL25Q9H293 177 aa16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 CWC25Q9NXE8 425 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 ERC1Q8IUD2 1116 aa16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 STARD3NLO95772 234 aa16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 MSNP26038 577 aaKnown RBP16.24■□□□□ 0.19
TNFRSF8-201ENST00000263932 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms