RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 CEMIPQ8WUJ3 1361 aa12.01□□□□□ -0.49
LCN1-201ENST00000263598 COL3A1P02461 1466 aaPredicted RBP12.01□□□□□ -0.49
LCN1-201ENST00000263598 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
LCN1-201ENST00000263598 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
LCN1-201ENST00000263598 DDNO94850 711 aaPredicted RBP12□□□□□ -0.49
LCN1-201ENST00000263598 CLEC4GQ6UXB4 293 aa12□□□□□ -0.49
LCN1-201ENST00000263598 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
LCN1-201ENST00000263598 CFAP53Q96M91 514 aa12□□□□□ -0.49
LCN1-201ENST00000263598 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
LCN1-201ENST00000263598 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
LCN1-201ENST00000263598 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
LCN1-201ENST00000263598 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
LCN1-201ENST00000263598 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
LCN1-201ENST00000263598 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
LCN1-201ENST00000263598 FER1L6Q2WGJ9 1857 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
LCN1-201ENST00000263598 KCNQ3O43525 872 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
LCN1-201ENST00000263598 NPR1P16066 1061 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 LDHDQ86WU2 507 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
LCN1-201ENST00000263598 NUDCQ9Y266 331 aa11.98□□□□□ -0.49
LCN1-201ENST00000263598 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
LCN1-201ENST00000263598 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
LCN1-201ENST00000263598 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
LCN1-201ENST00000263598 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
LCN1-201ENST00000263598 RGL2O15211 777 aa11.96□□□□□ -0.49
LCN1-201ENST00000263598 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
LCN1-201ENST00000263598 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
LCN1-201ENST00000263598 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
LCN1-201ENST00000263598 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
LCN1-201ENST00000263598 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
LCN1-201ENST00000263598 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
LCN1-201ENST00000263598 TAF1DQ9H5J8 278 aaPredicted RBP11.96□□□□□ -0.49
LCN1-201ENST00000263598 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
LCN1-201ENST00000263598 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
LCN1-201ENST00000263598 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
LCN1-201ENST00000263598 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
LCN1-201ENST00000263598 KLRG2A4D1S0 409 aaPredicted RBP11.95□□□□□ -0.5
LCN1-201ENST00000263598 U2AF1L5P0DN76 240 aaPredicted RBP11.95□□□□□ -0.5
LCN1-201ENST00000263598 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
LCN1-201ENST00000263598 U2AF1Q01081 240 aaKnown RBP eCLIP11.95□□□□□ -0.5
LCN1-201ENST00000263598 CNTNAP1P78357 1384 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
LCN1-201ENST00000263598 ALDH1B1P30837 517 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 EAPPQ56P03 285 aaPredicted RBP11.94□□□□□ -0.5
LCN1-201ENST00000263598 MCM10Q7L590 875 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 AIDAQ96BJ3 306 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
LCN1-201ENST00000263598 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
LCN1-201ENST00000263598 TMEM88BA6NKF7 163 aa11.93□□□□□ -0.5
LCN1-201ENST00000263598 FAM177BA6PVY3 158 aa11.93□□□□□ -0.5
LCN1-201ENST00000263598 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
LCN1-201ENST00000263598 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
LCN1-201ENST00000263598 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 CACNA1SQ13698 1873 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 EPHX2P34913 555 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
LCN1-201ENST00000263598 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
LCN1-201ENST00000263598 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
LCN1-201ENST00000263598 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 PRDM10Q9NQV6 1147 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 SCN4AP35499 1836 aa11.92□□□□□ -0.5
LCN1-201ENST00000263598 FZD9O00144 591 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 FOXN1O15353 648 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
LCN1-201ENST00000263598 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
LCN1-201ENST00000263598 VEGFBP49765 207 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 DCTN1Q14203 1278 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 NYXQ9GZU5 481 aa11.91□□□□□ -0.5
LCN1-201ENST00000263598 NEFMP07197 916 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 HLFQ16534 295 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 OLFM4Q6UX06 510 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 GPC2Q8N158 579 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 PNISRQ8TF01 805 aaKnown RBP11.9□□□□□ -0.5
LCN1-201ENST00000263598 PSMD1Q99460 953 aa11.9□□□□□ -0.5
LCN1-201ENST00000263598 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
LCN1-201ENST00000263598 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
LCN1-201ENST00000263598 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
LCN1-201ENST00000263598 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
LCN1-201ENST00000263598 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
LCN1-201ENST00000263598 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
LCN1-201ENST00000263598 RPGRQ92834 1020 aaKnown RBP11.89□□□□□ -0.51
LCN1-201ENST00000263598 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
LCN1-201ENST00000263598 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
LCN1-201ENST00000263598 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
LCN1-201ENST00000263598 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
LCN1-201ENST00000263598 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
LCN1-201ENST00000263598 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
LCN1-201ENST00000263598 MIS18AQ9NYP9 233 aa11.88□□□□□ -0.51
LCN1-201ENST00000263598 MAP3K15Q6ZN16 1313 aa11.87□□□□□ -0.51
LCN1-201ENST00000263598 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms