RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 SEC24BO95487 1268 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 MCM3P25205 808 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
PPM1F-201ENST00000263212 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
PPM1F-201ENST00000263212 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
PPM1F-201ENST00000263212 ATP8B2P98198 1209 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 TMC6Q7Z403 805 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 CCDC150Q8NCX0 1101 aa17.12■□□□□ 0.33
PPM1F-201ENST00000263212 INSRP06213 1382 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 FAM193AP78312 1265 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 A0A087WZG4 1122 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
PPM1F-201ENST00000263212 KLHL10Q6JEL2 608 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 VAMP4O75379 141 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
PPM1F-201ENST00000263212 TAF4BQ92750 862 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 PHF8Q9UPP1 1060 aa17.11■□□□□ 0.33
PPM1F-201ENST00000263212 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
PPM1F-201ENST00000263212 SPA17Q15506 151 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 SLC12A7Q9Y666 1083 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 MAP3K12Q12852 859 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 IFIT5Q13325 482 aaKnown RBP17.1■□□□□ 0.33
PPM1F-201ENST00000263212 INTS4Q96HW7 963 aaKnown RBP17.1■□□□□ 0.33
PPM1F-201ENST00000263212 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 ATP10BO94823 1461 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
PPM1F-201ENST00000263212 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
PPM1F-201ENST00000263212 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
PPM1F-201ENST00000263212 ORC3Q9UBD5 711 aaPredicted RBP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 COL17A1Q9UMD9 1497 aaPredicted RBP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
PPM1F-201ENST00000263212 F13A1P00488 732 aa17.09■□□□□ 0.33
PPM1F-201ENST00000263212 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 SSRP1Q08945 709 aaKnown RBP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 BMS1Q14692 1282 aaKnown RBP17.09■□□□□ 0.33
PPM1F-201ENST00000263212 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
PPM1F-201ENST00000263212 UBE2Q2Q8WVN8 375 aa17.08■□□□□ 0.33
PPM1F-201ENST00000263212 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.33
PPM1F-201ENST00000263212 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
PPM1F-201ENST00000263212 CENPHQ9H3R5 247 aa17.08■□□□□ 0.32
PPM1F-201ENST00000263212 ATP2B2Q01814 1243 aa17.08■□□□□ 0.32
PPM1F-201ENST00000263212 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
PPM1F-201ENST00000263212 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
PPM1F-201ENST00000263212 BIN1O00499 593 aa17.08■□□□□ 0.32
PPM1F-201ENST00000263212 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
PPM1F-201ENST00000263212 PLEKHM2Q8IWE5 1019 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 PLCH2O75038 1416 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 GOLIM4O00461 696 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 NECAB1Q8N987 351 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 ACEP12821 1306 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
PPM1F-201ENST00000263212 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
PPM1F-201ENST00000263212 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 YEATS4O95619 227 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 KANK3Q6NY19 840 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 BRF1Q92994 677 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 SHANK2Q9UPX8 1470 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 ANO6Q4KMQ2 910 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
PPM1F-201ENST00000263212 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
PPM1F-201ENST00000263212 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
PPM1F-201ENST00000263212 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
PPM1F-201ENST00000263212 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
PPM1F-201ENST00000263212 FBLN1P23142 703 aa17.05■□□□□ 0.32
PPM1F-201ENST00000263212 CALRP27797 417 aaKnown RBP17.05■□□□□ 0.32
PPM1F-201ENST00000263212 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
PPM1F-201ENST00000263212 DACT1Q9NYF0 836 aa17.05■□□□□ 0.32
PPM1F-201ENST00000263212 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 PZPP20742 1482 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
PPM1F-201ENST00000263212 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 POLR3GO15318 223 aaPredicted RBP17.04■□□□□ 0.32
PPM1F-201ENST00000263212 SKILP12757 684 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms