RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 LIG1P18858 919 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 SERPINC1P01008 464 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 NLRP5P59047 1200 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 CCDC97Q96F63 343 aaPredicted RBP15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 KCNA6P17658 529 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 CFAP45Q9UL16 551 aa15.85■□□□□ 0.13
PDGFRB-201ENST00000261799 DHX8Q14562 1220 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 EXOC6BQ9Y2D4 811 aa15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 FLIIQ13045 1269 aa15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 PICALMQ13492 652 aa15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 SUPT20HQ8NEM7 779 aa15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
PDGFRB-201ENST00000261799 WDR33Q9C0J8 1336 aaKnown RBP15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 KIF20AO95235 890 aa15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 PLS1Q14651 629 aa15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.13
PDGFRB-201ENST00000261799 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 MBD3O95983 291 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 TSPY3P0CV98 308 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 TSPY8P0CW00 308 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 KRT85P78386 507 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 MAP3K9P80192 1104 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 GOLGA8AA7E2F4 631 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 GOLGA8BA8MQT2 603 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 PATL2C9JE40 543 aaKnown RBP15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 TMEM57Q8N5G2 664 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 FIBPO43427 364 aa15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 SSR1P43307 286 aaKnown RBP15.83■□□□□ 0.12
PDGFRB-201ENST00000261799 H0YIN7 160 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 RIMBP2O15034 1052 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 CASTP20810 708 aaKnown RBP15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 PLCG2P16885 1265 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 ARGLU1Q9NWB6 273 aaPredicted RBP15.82■□□□□ 0.12
PDGFRB-201ENST00000261799 ZRSR2Q15696 482 aaKnown RBP15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 ZNF408Q9H9D4 720 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 MFSD6Q6ZSS7 791 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 CETN2P41208 172 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 TRIM5Q9C035 493 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 SLC4A8Q2Y0W8 1093 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
PDGFRB-201ENST00000261799 F6X3S4 739 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 CCDC181Q5TID7 509 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 TBX22Q9Y458 520 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 GOLIM4O00461 696 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 ABCC1P33527 1531 aa15.8■□□□□ 0.12
PDGFRB-201ENST00000261799 TCIRG1Q13488 830 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 CKAP2LQ8IYA6 745 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 EVI5LQ96CN4 794 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 CYP7A1P22680 504 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 PICK1Q9NRD5 415 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 PDE6BP35913 854 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 WDR62O43379 1518 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
PDGFRB-201ENST00000261799 NCBP1Q09161 790 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 SEPT7Q16181 437 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 NAA16Q6N069 864 aaPredicted RBP15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 FLT4P35916 1363 aa15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 NEFHP12036 1026 aa15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 GCP02774 474 aa15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
PDGFRB-201ENST00000261799 SLFN5Q08AF3 891 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 FLAD1Q8NFF5 587 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 SH2D4AQ9H788 454 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 TMEM67Q5HYA8 995 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 BICD1Q96G01 975 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.12
PDGFRB-201ENST00000261799 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms