RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 KCNQ3O43525 872 aa17.44■□□□□ 0.38
SFSWAP-201ENST00000261674 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
SFSWAP-201ENST00000261674 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
SFSWAP-201ENST00000261674 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 KCNJ4P48050 445 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 CUL4AQ13619 759 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 USP25Q9UHP3 1055 aa17.43■□□□□ 0.38
SFSWAP-201ENST00000261674 KAT6BQ8WYB5 2073 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 UQCRHLA0A096LP55 91 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 UQCRHP07919 91 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 PDLIM2Q96JY6 352 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
SFSWAP-201ENST00000261674 AK2P54819 239 aa17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 SOS1Q07889 1333 aaPredicted RBP17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 ANAPC15P60006 121 aa17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 CCDC83Q8IWF9 413 aa17.41■□□□□ 0.38
SFSWAP-201ENST00000261674 SALL3Q9BXA9 1300 aa17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 DCCP43146 1447 aa17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 CNTROBQ8N137 903 aa17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 PXDNQ92626 1479 aa17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
SFSWAP-201ENST00000261674 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 HSPA4P34932 840 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 TEFQ10587 303 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 CERKQ8TCT0 537 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 KIF1BPQ96EK5 621 aa17.39■□□□□ 0.37
SFSWAP-201ENST00000261674 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 C17orf53Q8N3J3 647 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 TATP17735 454 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 PHF14O94880 888 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 SYT1P21579 422 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 HSPA1LP34931 641 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 FERMT3Q86UX7 667 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 TCEANC2Q96MN5 208 aa17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-201ENST00000261674 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 SGSM2O43147 1006 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 HS1BP3Q53T59 392 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 NECAB1Q8N987 351 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 STX6O43752 255 aa17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.37■□□□□ 0.37
SFSWAP-201ENST00000261674 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 LIMCH1Q9UPQ0 1083 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 LARGE1O95461 756 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 RUFY3Q7L099 469 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 SIL1Q9H173 461 aa17.36■□□□□ 0.37
SFSWAP-201ENST00000261674 ZNF500O60304 480 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 PTH1RQ03431 593 aa17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 TSC1Q92574 1164 aa17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 NFAT5O94916 1531 aa17.35■□□□□ 0.37
SFSWAP-201ENST00000261674 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 ADCY5O95622 1261 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 RAD50Q92878 1312 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 GJB2P29033 226 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 SPC24Q8NBT2 197 aa17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-201ENST00000261674 EP400Q96L91 3159 aa17.33■□□□□ 0.37
SFSWAP-201ENST00000261674 CSPP1Q1MSJ5 1256 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms