RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KCNJ4P48050 445 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 DIAPH3Q9NSV4 1193 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 MTMR6Q9Y217 621 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 LIG1P18858 919 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 FUCA2Q9BTY2 467 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
LMNB1-201ENST00000261366 NBPF7P0C2Y1 421 aaPredicted RBP18.99■□□□□ 0.63
LMNB1-201ENST00000261366 GTF2F1P35269 517 aaKnown RBP eCLIP18.99■□□□□ 0.632e-34■■■■■ 36.5
LMNB1-201ENST00000261366 AMPHP49418 695 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 CCDC186Q7Z3E2 898 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 CNTROBQ8N137 903 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 PODXL2Q9NZ53 605 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 CCDC192P0DO97 292 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
LMNB1-201ENST00000261366 SSH2Q76I76 1423 aa18.98■□□□□ 0.63
LMNB1-201ENST00000261366 PTPRUQ92729 1446 aa18.98■□□□□ 0.63
LMNB1-201ENST00000261366 STK3Q13188 491 aa18.98■□□□□ 0.63
LMNB1-201ENST00000261366 EYA1Q99502 592 aa18.98■□□□□ 0.63
LMNB1-201ENST00000261366 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
LMNB1-201ENST00000261366 HDGFL1Q5TGJ6 251 aa18.97■□□□□ 0.63
LMNB1-201ENST00000261366 LARP1BQ659C4 914 aaKnown RBP18.97■□□□□ 0.63
LMNB1-201ENST00000261366 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
LMNB1-201ENST00000261366 ME3Q16798 604 aa18.97■□□□□ 0.63
LMNB1-201ENST00000261366 CDC37L1Q7L3B6 337 aa18.97■□□□□ 0.63
LMNB1-201ENST00000261366 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
LMNB1-201ENST00000261366 TRIM5Q9C035 493 aa18.96■□□□□ 0.63
LMNB1-201ENST00000261366 GOLGA6L4A6NEF3 574 aa18.96■□□□□ 0.63
LMNB1-201ENST00000261366 GOLGA6L6A8MZA4 724 aa18.96■□□□□ 0.63
LMNB1-201ENST00000261366 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
LMNB1-201ENST00000261366 ANO6Q4KMQ2 910 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 NUP62CLQ9H1M0 184 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 DACT1Q9NYF0 836 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 TYRO3Q06418 890 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 ST3GAL1Q11201 340 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 MAP3K11Q16584 847 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 CYP46A1Q9Y6A2 500 aa18.95■□□□□ 0.62
LMNB1-201ENST00000261366 PLEKHG3A1L390 1219 aa18.94■□□□□ 0.62
LMNB1-201ENST00000261366 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
LMNB1-201ENST00000261366 TNMDQ9H2S6 317 aa18.94■□□□□ 0.62
LMNB1-201ENST00000261366 PA2G4Q9UQ80 394 aaKnown RBP18.94■□□□□ 0.62
LMNB1-201ENST00000261366 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
LMNB1-201ENST00000261366 MRVI1Q9Y6F6 885 aa18.94■□□□□ 0.62
LMNB1-201ENST00000261366 FAM200AQ8TCP9 573 aa18.93■□□□□ 0.62
LMNB1-201ENST00000261366 KIF1BPQ96EK5 621 aa18.93■□□□□ 0.62
LMNB1-201ENST00000261366 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
LMNB1-201ENST00000261366 TPCN1Q9ULQ1 816 aa18.93■□□□□ 0.62
LMNB1-201ENST00000261366 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
LMNB1-201ENST00000261366 FOSBP53539 338 aa18.93■□□□□ 0.62
LMNB1-201ENST00000261366 CEBPZQ03701 1054 aaKnown RBP18.93■□□□□ 0.62
LMNB1-201ENST00000261366 NGDNQ8NEJ9 315 aaKnown RBP18.93■□□□□ 0.62
LMNB1-201ENST00000261366 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.93■□□□□ 0.62
LMNB1-201ENST00000261366 CBX8Q9HC52 389 aa18.92■□□□□ 0.62
LMNB1-201ENST00000261366 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
LMNB1-201ENST00000261366 KRT85P78386 507 aa18.92■□□□□ 0.62
LMNB1-201ENST00000261366 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
LMNB1-201ENST00000261366 GNAT3A8MTJ3 354 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 IL17REQ8NFR9 667 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 A0A087WWV3 80 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 TNNT1P13805 278 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 FAM227BQ96M60 508 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 DNAJC25Q9H1X3 360 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 PI4KAP2A4QPH2 592 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
LMNB1-201ENST00000261366 PI4KAP1Q8N8J0 262 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 BICD2Q8TD16 824 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 TAF6LQ9Y6J9 622 aa18.91■□□□□ 0.62
LMNB1-201ENST00000261366 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
LMNB1-201ENST00000261366 ZNF771Q7L3S4 317 aaPredicted RBP18.9■□□□□ 0.62
LMNB1-201ENST00000261366 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
LMNB1-201ENST00000261366 TPD52L1Q16890 204 aaPredicted RBP18.9■□□□□ 0.62
LMNB1-201ENST00000261366 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
LMNB1-201ENST00000261366 KCNA6P17658 529 aa18.89■□□□□ 0.61
LMNB1-201ENST00000261366 ARID5BQ14865 1188 aa18.89■□□□□ 0.61
LMNB1-201ENST00000261366 SPATA32Q96LK8 384 aa18.89■□□□□ 0.61
LMNB1-201ENST00000261366 NPHP1O15259 732 aa18.89■□□□□ 0.61
LMNB1-201ENST00000261366 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-201ENST00000261366 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
LMNB1-201ENST00000261366 USP6P35125 1406 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 AOX1Q06278 1338 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 ANKRD7Q92527 254 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
LMNB1-201ENST00000261366 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
LMNB1-201ENST00000261366 NR1I2O75469 434 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 IFIT2P09913 472 aaKnown RBP18.87■□□□□ 0.61
LMNB1-201ENST00000261366 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
LMNB1-201ENST00000261366 IL17RAQ96F46 866 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 GTPBP4Q9BZE4 634 aaKnown RBP18.87■□□□□ 0.61
LMNB1-201ENST00000261366 GLRX3O76003 335 aaKnown RBP18.87■□□□□ 0.61
LMNB1-201ENST00000261366 CCDC8Q9H0W5 538 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-201ENST00000261366 CLIP2Q9UDT6 1046 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 C3P01024 1663 aa18.87■□□□□ 0.61
LMNB1-201ENST00000261366 TPM3P06753 285 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms