RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PTPN14Q15678 1187 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 SPTY2D1Q68D10 685 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-201ENST00000261037 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-201ENST00000261037 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
COL8A1-201ENST00000261037 C6orf229H3BNL8 230 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 URI1O94763 535 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-201ENST00000261037 TMEM266Q2M3C6 531 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 TRIM27P14373 513 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 PDCL2Q8N4E4 241 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC196A0A1B0GTZ2 297 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 MACROD2A1Z1Q3 448 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 FLIIQ13045 1269 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.16
COL8A1-201ENST00000261037 KIF5CO60282 957 aa14.02□□□□□ -0.17
COL8A1-201ENST00000261037 TDRD12Q587J7 1177 aaKnown RBP14.02□□□□□ -0.17
COL8A1-201ENST00000261037 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.17
COL8A1-201ENST00000261037 DYDC1Q8WWB3 177 aa14.02□□□□□ -0.17
COL8A1-201ENST00000261037 TNPO1Q92973 898 aaKnown RBP14.02□□□□□ -0.17
COL8A1-201ENST00000261037 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.17
COL8A1-201ENST00000261037 BCCIPQ9P287 314 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL8A1-201ENST00000261037 USP25Q9UHP3 1055 aa14.02□□□□□ -0.17
COL8A1-201ENST00000261037 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.17
COL8A1-201ENST00000261037 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 WASLO00401 505 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 ANXA1P04083 346 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 ANAPC15P60006 121 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 ZSCAN12O43309 604 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 FBLN1P23142 703 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 CRACR2AQ9BSW2 395 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 PRDM10Q9NQV6 1147 aa14.01□□□□□ -0.17
COL8A1-201ENST00000261037 DBF4Q9UBU7 674 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-201ENST00000261037 TMCO3Q6UWJ1 677 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 EVI5LQ96CN4 794 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
COL8A1-201ENST00000261037 TMC6Q7Z403 805 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 MBIPQ9NS73 344 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 TBC1D9Q6ZT07 1266 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 LUZP1Q86V48 1076 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 MICU3Q86XE3 530 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 TBC1D2Q9BYX2 928 aa14□□□□□ -0.17
COL8A1-201ENST00000261037 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 CBX1P83916 185 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 KRT28Q7Z3Y7 464 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 ZSCAN30Q86W11 494 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 NGLY1Q96IV0 654 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 MAP2K1Q02750 393 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-201ENST00000261037 RNF41Q9H4P4 317 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-201ENST00000261037 MTIF2P46199 727 aaKnown RBP13.99□□□□□ -0.17
COL8A1-201ENST00000261037 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 SLC26A6Q9BXS9 759 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 NOS1P29475 1434 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 USP8P40818 1118 aa13.99□□□□□ -0.17
COL8A1-201ENST00000261037 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-201ENST00000261037 EXOC5O00471 708 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 CETN2P41208 172 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 PPM1FP49593 454 aaPredicted RBP13.98□□□□□ -0.17
COL8A1-201ENST00000261037 UBE3BQ7Z3V4 1068 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 LDHAL6AQ6ZMR3 332 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 RAB34Q9BZG1 259 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 KAT14Q9H8E8 782 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 PTPRCP08575 1304 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 GSTTP1A0A1W2PQM5 241 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 IFFO1Q0D2I5 559 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 TCERG1LQ5VWI1 586 aa13.98□□□□□ -0.17
COL8A1-201ENST00000261037 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
COL8A1-201ENST00000261037 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 ZNF622Q969S3 477 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL8A1-201ENST00000261037 C16orf45Q96MC5 204 aaPredicted RBP13.97□□□□□ -0.17
COL8A1-201ENST00000261037 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 BAG4O95429 457 aaKnown RBP13.97□□□□□ -0.17
COL8A1-201ENST00000261037 YEATS4O95619 227 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 LRPPRCP42704 1394 aaKnown RBP13.97□□□□□ -0.17
COL8A1-201ENST00000261037 CCDC40Q4G0X9 1142 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 FEZ1Q99689 392 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 IDEP14735 1019 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL8A1-201ENST00000261037 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
COL8A1-201ENST00000261037 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 POLR3GO15318 223 aaPredicted RBP13.96□□□□□ -0.17
COL8A1-201ENST00000261037 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
COL8A1-201ENST00000261037 CCDC91Q7Z6B0 441 aa13.96□□□□□ -0.17
COL8A1-201ENST00000261037 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms