RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SPATA31A3Q5VYP0 1347 aa13.05□□□□□ -0.32
CHRNA1-201ENST00000261007 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 PHF14O94880 888 aa13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 PDE1AP54750 535 aa13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-201ENST00000261007 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 SDSP20132 328 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 DMTNQ08495 405 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 BEND3Q5T5X7 828 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 BRD1O95696 1058 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 POLA2Q14181 598 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
CHRNA1-201ENST00000261007 MRC1P22897 1456 aa13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 PTMAP06454 111 aaKnown RBP13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
CHRNA1-201ENST00000261007 SALL3Q9BXA9 1300 aa13.02□□□□□ -0.33
CHRNA1-201ENST00000261007 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 ERC2O15083 957 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 MX1P20591 662 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 CUL4AQ13619 759 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 APBB1O00213 710 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 KCNQ3O43525 872 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 PHKG2P15735 406 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 ADCY9O60503 1353 aa13.01□□□□□ -0.33
CHRNA1-201ENST00000261007 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
CHRNA1-201ENST00000261007 MTX1Q13505 466 aa13□□□□□ -0.33
CHRNA1-201ENST00000261007 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
CHRNA1-201ENST00000261007 DCAF5Q96JK2 942 aa13□□□□□ -0.33
CHRNA1-201ENST00000261007 GTPBP4Q9BZE4 634 aaKnown RBP13□□□□□ -0.33
CHRNA1-201ENST00000261007 XIRP1Q702N8 1843 aaKnown RBP13□□□□□ -0.33
CHRNA1-201ENST00000261007 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
CHRNA1-201ENST00000261007 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
CHRNA1-201ENST00000261007 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 LETM1O95202 739 aaPredicted RBP12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 TMX3Q96JJ7 454 aa12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 MEGF6O75095 1541 aa12.99□□□□□ -0.33
CHRNA1-201ENST00000261007 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 ZSCAN20P17040 1043 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 IL17RAQ96F46 866 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 SPTLC3Q9NUV7 552 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 ANAPC15P60006 121 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 DNTTIP2Q5QJE6 756 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
CHRNA1-201ENST00000261007 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 MCCP23508 829 aa12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
CHRNA1-201ENST00000261007 UTYO14607 1347 aa12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 KIF20AO95235 890 aa12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
CHRNA1-201ENST00000261007 NEK4P51957 841 aa12.96□□□□□ -0.34
CHRNA1-201ENST00000261007 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.34
CHRNA1-201ENST00000261007 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-201ENST00000261007 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.34
CHRNA1-201ENST00000261007 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 TPM3P06753 285 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 HSPA2P54652 639 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-201ENST00000261007 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
CHRNA1-201ENST00000261007 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms