RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
CCDC115-201ENST00000259229 C1orf115Q9H7X2 142 aa22.4■■□□□ 1.18
CCDC115-201ENST00000259229 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.18
CCDC115-201ENST00000259229 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.18
CCDC115-201ENST00000259229 PLBD2Q8NHP8 589 aa22.39■■□□□ 1.18
CCDC115-201ENST00000259229 ANKRD36CQ5JPF3 1778 aa22.39■■□□□ 1.18
CCDC115-201ENST00000259229 IGKV5-2P06315 115 aa22.39■■□□□ 1.17
CCDC115-201ENST00000259229 RIC3Q7Z5B4 369 aa22.39■■□□□ 1.17
CCDC115-201ENST00000259229 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.17
CCDC115-201ENST00000259229 USP44Q9H0E7 712 aa22.39■■□□□ 1.17
CCDC115-201ENST00000259229 CCDC87Q9NVE4 849 aa22.39■■□□□ 1.17
CCDC115-201ENST00000259229 KCNQ4P56696 695 aa22.38■■□□□ 1.17
CCDC115-201ENST00000259229 BCORQ6W2J9 1755 aa22.37■■□□□ 1.17
CCDC115-201ENST00000259229 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
CCDC115-201ENST00000259229 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
CCDC115-201ENST00000259229 TRIM37O94972 964 aa22.37■■□□□ 1.17
CCDC115-201ENST00000259229 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
CCDC115-201ENST00000259229 CWF19L2Q2TBE0 894 aaKnown RBP22.37■■□□□ 1.17
CCDC115-201ENST00000259229 LINS1Q8NG48 757 aa22.37■■□□□ 1.17
CCDC115-201ENST00000259229 CNTNAP4Q9C0A0 1308 aa22.36■■□□□ 1.17
CCDC115-201ENST00000259229 NUP98P52948 1817 aa22.35■■□□□ 1.17
CCDC115-201ENST00000259229 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
CCDC115-201ENST00000259229 SIRT2Q8IXJ6 389 aa22.35■■□□□ 1.17
CCDC115-201ENST00000259229 HDAC1Q13547 482 aaPredicted RBP22.35■■□□□ 1.17
CCDC115-201ENST00000259229 CENPQQ7L2Z9 268 aaPredicted RBP22.35■■□□□ 1.17
CCDC115-201ENST00000259229 MYD88Q99836 296 aa22.35■■□□□ 1.17
CCDC115-201ENST00000259229 NEURL1BA8MQ27 555 aa22.34■■□□□ 1.17
CCDC115-201ENST00000259229 ZBTB3Q9H5J0 574 aa22.34■■□□□ 1.17
CCDC115-201ENST00000259229 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
CCDC115-201ENST00000259229 RGPD3A6NKT7 1758 aaPredicted RBP22.34■■□□□ 1.17
CCDC115-201ENST00000259229 RGPD4Q7Z3J3 1758 aa22.34■■□□□ 1.17
CCDC115-201ENST00000259229 SCN7AQ01118 1682 aa22.33■■□□□ 1.17
CCDC115-201ENST00000259229 GNAI3P08754 354 aa22.33■■□□□ 1.17
CCDC115-201ENST00000259229 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
CCDC115-201ENST00000259229 UTYO14607 1347 aa22.33■■□□□ 1.16
CCDC115-201ENST00000259229 MAP3K15Q6ZN16 1313 aa22.33■■□□□ 1.16
CCDC115-201ENST00000259229 NBPF7P0C2Y1 421 aaPredicted RBP22.32■■□□□ 1.16
CCDC115-201ENST00000259229 CEP85Q6P2H3 762 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 LRRC4BQ9NT99 713 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 C4AP0C0L4 1744 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 COL15A1P39059 1388 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 NEXNQ0ZGT2 675 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 ANKRD44Q8N8A2 993 aa22.31■■□□□ 1.16
CCDC115-201ENST00000259229 GNAI2P04899 355 aa22.3■■□□□ 1.16
CCDC115-201ENST00000259229 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
CCDC115-201ENST00000259229 KIF6Q6ZMV9 814 aa22.3■■□□□ 1.16
CCDC115-201ENST00000259229 RWDD1Q9H446 243 aaPredicted RBP22.3■■□□□ 1.16
CCDC115-201ENST00000259229 UBR3Q6ZT12 1888 aa22.29■■□□□ 1.16
CCDC115-201ENST00000259229 UBTFL1P0CB47 393 aaPredicted RBP22.29■■□□□ 1.16
CCDC115-201ENST00000259229 GCKRQ14397 625 aa22.29■■□□□ 1.16
CCDC115-201ENST00000259229 LRRFIP2Q9Y608 721 aaKnown RBP22.29■■□□□ 1.16
CCDC115-201ENST00000259229 ATP5J2-PTCD1G3V325 749 aa22.28■■□□□ 1.16
CCDC115-201ENST00000259229 GRM8O00222 908 aa22.28■■□□□ 1.16
CCDC115-201ENST00000259229 ISCA1Q9BUE6 129 aa22.28■■□□□ 1.16
CCDC115-201ENST00000259229 HLFQ16534 295 aa22.28■■□□□ 1.16
CCDC115-201ENST00000259229 GIGYF2Q6Y7W6 1299 aaKnown RBP22.28■■□□□ 1.16
CCDC115-201ENST00000259229 DZIP3Q86Y13 1208 aaKnown RBP22.28■■□□□ 1.16
CCDC115-201ENST00000259229 RPAP2Q8IXW5 612 aaPredicted RBP22.27■■□□□ 1.16
CCDC115-201ENST00000259229 TBC1D2BQ9UPU7 963 aa22.27■■□□□ 1.16
CCDC115-201ENST00000259229 ERVV-1B6SEH8 477 aa22.26■■□□□ 1.15
CCDC115-201ENST00000259229 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
CCDC115-201ENST00000259229 AMIGO3Q86WK7 504 aa22.26■■□□□ 1.15
CCDC115-201ENST00000259229 PROM2Q8N271 834 aa22.26■■□□□ 1.15
CCDC115-201ENST00000259229 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
CCDC115-201ENST00000259229 CASP7P55210 303 aa22.25■■□□□ 1.15
CCDC115-201ENST00000259229 SMC5Q8IY18 1101 aa22.25■■□□□ 1.15
CCDC115-201ENST00000259229 KAZALD1Q96I82 304 aa22.25■■□□□ 1.15
CCDC115-201ENST00000259229 C9orf78Q9NZ63 289 aaPredicted RBP22.25■■□□□ 1.15
CCDC115-201ENST00000259229 SLC27A3Q5K4L6 730 aa22.24■■□□□ 1.15
CCDC115-201ENST00000259229 SKAP1Q86WV1 359 aa22.24■■□□□ 1.15
CCDC115-201ENST00000259229 PLSCR1O15162 318 aa22.24■■□□□ 1.15
CCDC115-201ENST00000259229 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
CCDC115-201ENST00000259229 TRIM28Q13263 835 aaKnown RBP22.24■■□□□ 1.15
CCDC115-201ENST00000259229 SUCLG2Q96I99 432 aa22.24■■□□□ 1.15
CCDC115-201ENST00000259229 SMIM5Q71RC9 77 aa22.23■■□□□ 1.15
CCDC115-201ENST00000259229 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
CCDC115-201ENST00000259229 TUBGCP6Q96RT7 1819 aa22.22■■□□□ 1.15
CCDC115-201ENST00000259229 PNMA6EA0A0J9YXQ4 647 aa22.22■■□□□ 1.15
CCDC115-201ENST00000259229 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
CCDC115-201ENST00000259229 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
CCDC115-201ENST00000259229 H7C1W4 665 aa22.21■■□□□ 1.15
CCDC115-201ENST00000259229 GNPATO15228 680 aa22.21■■□□□ 1.15
CCDC115-201ENST00000259229 ATP8B2P98198 1209 aa22.21■■□□□ 1.15
CCDC115-201ENST00000259229 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.15
CCDC115-201ENST00000259229 A0A087WZG4 1122 aa22.2■■□□□ 1.15
CCDC115-201ENST00000259229 APBA3O96018 575 aa22.2■■□□□ 1.15
CCDC115-201ENST00000259229 MTX1Q13505 466 aa22.2■■□□□ 1.15
CCDC115-201ENST00000259229 ARXQ96QS3 562 aa22.2■■□□□ 1.15
CCDC115-201ENST00000259229 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
CCDC115-201ENST00000259229 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
CCDC115-201ENST00000259229 UBE3BQ7Z3V4 1068 aa22.2■■□□□ 1.14
CCDC115-201ENST00000259229 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
CCDC115-201ENST00000259229 ZNF34Q8IZ26 560 aa22.2■■□□□ 1.14
CCDC115-201ENST00000259229 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
CCDC115-201ENST00000259229 POLA2Q14181 598 aa22.19■■□□□ 1.14
CCDC115-201ENST00000259229 NLRP10Q86W26 655 aa22.19■■□□□ 1.14
CCDC115-201ENST00000259229 DCTPP1Q9H773 170 aa22.19■■□□□ 1.14
CCDC115-201ENST00000259229 EPHA10Q5JZY3 1008 aa22.18■■□□□ 1.14
CCDC115-201ENST00000259229 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
CCDC115-201ENST00000259229 BICC1Q9H694 974 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms