RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 HSPA1LP34931 641 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.54□□□□□ -1.26e-7■■■■■ 348.8
BRIP1-201ENST00000259008 ABCA8O94911 1581 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 A0A0U1RQG5 324 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-201ENST00000259008 HCLS1P14317 486 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-201ENST00000259008 CT47A1Q5JQC4 288 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-201ENST00000259008 ANKRD20A12PQ8NF67 263 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 TNIP1Q15025 636 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 UNC5CLQ8IV45 518 aa7.54□□□□□ -1.2
BRIP1-201ENST00000259008 TCOF1Q13428 1488 aaKnown RBP7.53□□□□□ -1.2
BRIP1-201ENST00000259008 SAMD9LQ8IVG5 1584 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 TPM1P09493 284 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 LIG1P18858 919 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 DPP8Q6V1X1 898 aaPredicted RBP7.53□□□□□ -1.2
BRIP1-201ENST00000259008 CYP46A1Q9Y6A2 500 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 TXLNAP40222 546 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 NEK4P51957 841 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 C22orf23Q9BZE7 217 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 NLRP1Q9C000 1473 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 DPY19L2Q6NUT2 758 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 PSDA5PKW4 1024 aaPredicted RBP7.53□□□□□ -1.2
BRIP1-201ENST00000259008 SLFN5Q08AF3 891 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 ODF2Q5BJF6 829 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 CHD1LQ86WJ1 897 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 NIM1KQ8IY84 436 aa7.53□□□□□ -1.2
BRIP1-201ENST00000259008 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.53□□□□□ -1.2
BRIP1-201ENST00000259008 PLEKHG1Q9ULL1 1385 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 CYP7A1P22680 504 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 C2CD5Q86YS7 1000 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 KIAA0232Q92628 1395 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
BRIP1-201ENST00000259008 TSPY2A6NKD2 308 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 CRNKL1Q9BZJ0 848 aaKnown RBP7.52□□□□□ -1.21
BRIP1-201ENST00000259008 METP08581 1390 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 KDM5CP41229 1560 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 A1BGP04217 495 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 TTF1Q15361 905 aaPredicted RBP7.52□□□□□ -1.21
BRIP1-201ENST00000259008 CWF19L2Q2TBE0 894 aaKnown RBP7.52□□□□□ -1.21
BRIP1-201ENST00000259008 FAM89AQ96GI7 184 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 LGR6Q9HBX8 967 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 ABCC11Q96J66 1382 aa7.52□□□□□ -1.21
BRIP1-201ENST00000259008 MX1P20591 662 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 NAP1L1P55209 391 aaKnown RBP7.51□□□□□ -1.21
BRIP1-201ENST00000259008 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 PPIP5K2O43314 1243 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 TNNI2P48788 182 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 RPAP2Q8IXW5 612 aaPredicted RBP7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ZGPATQ8N5A5 531 aaKnown RBP7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ADGBQ8N7X0 1667 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 DDX49Q9Y6V7 483 aaKnown RBP7.51□□□□□ -1.21
BRIP1-201ENST00000259008 PTPRCP08575 1304 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ZNF213O14771 459 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 GGA1Q9UJY5 639 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 RBM19Q9Y4C8 960 aaKnown RBP7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ASXL1Q8IXJ9 1541 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 TSPY3P0CV98 308 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 TSPY8P0CW00 308 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 PDE6BP35913 854 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ALDH1L2Q3SY69 923 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 PPP4R3AQ6IN85 833 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 ZNF790Q6PG37 636 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 IQCA1Q86XH1 822 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 SLC52A2Q9HAB3 445 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 MAGI2Q86UL8 1455 aa7.51□□□□□ -1.21
BRIP1-201ENST00000259008 HAND2P61296 217 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 PDE4BQ07343 736 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 AAMPQ13685 434 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 KRT24Q2M2I5 525 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 NAA16Q6N069 864 aaPredicted RBP7.5□□□□□ -1.21
BRIP1-201ENST00000259008 ANKRD2Q9GZV1 360 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 PDRG1Q9NUG6 133 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 SBNO1A3KN83 1393 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 BLOC1S2Q6QNY1 142 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 BRINP3Q76B58 766 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 MPHOSPH6Q99547 160 aaKnown RBP7.5□□□□□ -1.21
BRIP1-201ENST00000259008 SAP30BPQ9UHR5 308 aaKnown RBP7.5□□□□□ -1.21
BRIP1-201ENST00000259008 ZBTB7AO95365 584 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 TCIRG1Q13488 830 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 TSHZ3Q63HK5 1081 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 KSR2Q6VAB6 950 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 NOL7Q9UMY1 257 aaKnown RBP7.5□□□□□ -1.21
BRIP1-201ENST00000259008 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
BRIP1-201ENST00000259008 FLAD1Q8NFF5 587 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 KAT14Q9H8E8 782 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
BRIP1-201ENST00000259008 UQCRFS1P1P0C7P4 283 aa7.49□□□□□ -1.21
BRIP1-201ENST00000259008 STK38Q15208 465 aa7.49□□□□□ -1.21
BRIP1-201ENST00000259008 MIGA1Q8NAN2 632 aa7.49□□□□□ -1.21
BRIP1-201ENST00000259008 CTCFLQ8NI51 663 aaPredicted RBP7.49□□□□□ -1.21
BRIP1-201ENST00000259008 PICK1Q9NRD5 415 aa7.49□□□□□ -1.21
BRIP1-201ENST00000259008 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
BRIP1-201ENST00000259008 EDC4Q6P2E9 1401 aaKnown RBP7.49□□□□□ -1.21
BRIP1-201ENST00000259008 CASTP20810 708 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 621.8 ms